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See other CASKIN1 CNV Assays ›
Gene Symbol
CASKIN1
Assay Reference Genome
Location

Chr.16:2183663 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02705835_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57524

Gene Name:

 CASK interacting protein 1

Gene Aliases:

 ANKS5A

Location:

 Chr.16:2177183-2196464 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 16 - Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CASKIN1 NM_020764.3 NP_065815.1
AB037727.1 BAA92544.1
AF451977.1 AAL49758.1
BC042011.1 AAH42011.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication HAGHL HBQ1 LOC106660606 C16orf59 EME2 TPSAB1 ERVK13-1 TSR3 RNPS1 MIR6768 TPSB2 E4F1 DECR2 CLCN7 RGS11 WFIKKN1 ARHGDIG GFER LOC652276 LOC100287175 LOC729652 MIR662 HBM BAIAP3 RHBDL1 C1QTNF8 LOC107987233 NARFL MIR6767 HBZ POLR3K GNG13 MAPK8IP3 KCTD5 PIGQ HN1L LOC105371047 MSLN IGFALS MLST8 AXIN1 UNKL NTN3 RAB26 MIR3180-5 CHTF18 RAB11FIP3 LOC105371046 NHLRC4 JMJD8 RPS2 CACNA1H LOC105371184 LUC7L FAM173A MIR3177 SNORD60 HBA1 MIR1225 GNPTG MSRB1 ATP6V0C RAB40C MIR3176 STUB1 CRAMP1 MIR3677 NPRL3 C16orf91 HBA2 BRICD5 NTHL1 RPL3L RPL23AP5 MRPS34 RNF151 PGP SYNGR3 MIR4516 RHBDF1 SNORA10 LOC101929280 PDIA2 CASKIN1 MIR5587 SSTR5 LOC105371045 HS3ST6 TMEM204 NME3 PRSS29P CCDC154 TELO2 LOC100134368 NDUFB10 TBC1D24 LOC105371049 SNRNP25 PRR25 PKD1 NPW SSTR5-AS1 FAHD1 DDX11L10 SOX8 TMEM8A FBXL16 SNORA78 PRSS27 SNHG19 RHOT2 MIR3178 MIR6859-4 DNASE1L2 PRR35 WASIR2 TBL3 PTX4 UBE2I SNORA64 CEMP1 MIR940 ABCA3 RPUSD1 METTL26 MEIOB LOC105371038 MIR6511B1 TPSG1 IFT140 FAM234A MPG LMF1-AS1 CCDC78 MCRIP2 CCNF FLJ42627 MRPL28 TPSD1 SPSB3 WDR24 PDPK1 TRAF7 ZNF598 SNHG9 TSC2 LOC107984876 HAGH LINC00254 METRN NOXO1 ABCA17P CAPN15 WDR90 LINC00235 NUBP2 NME4 ECI1 SLC9A3R2 AMDHD2 LMF1 MIR4717
dgv4859n54 Chr.16:1971892 - 2264400 on Build GRCh38 Loss PGP SYNGR3 MIR4516 MLST8 CASKIN1 MIR6511B1 RAB26 MIR3180-5 RNPS1 LOC105371049 E4F1 SNORD60 MIR1225 PKD1 NPW TRAF7 ZNF598 GFER TSC2 NOXO1 SNHG19 DNASE1L2 BRICD5 NTHL1 TBL3 ECI1 SLC9A3R2
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss PKD1 PGP TRAF7 MIR4516 MLST8 CASKIN1 MIR6511B1 TSC2 RAB26 MIR3180-5 SNHG19 DNASE1L2 BRICD5 LOC105371049 ECI1 E4F1 SNORD60 MIR1225
dgv4863n54 Chr.16:2141733 - 2274302 on Build GRCh38 Loss PGP TRAF7 MLST8 LOC106660606 CASKIN1 RAB26 MIR3677 SNHG19 DNASE1L2 BRICD5 RNPS1 ECI1 E4F1 SNORD60 MIR940
nsv571190 Chr.16:2055054 - 2200730 on Build GRCh38 Loss PKD1 TRAF7 MIR4516 CASKIN1 MIR6511B1 LOC105371049 TSC2 RAB26 MIR3180-5 SNORD60 MIR1225 SNHG19
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain ABCA3 PGP MIR4516 MLST8 LOC106660606 CASKIN1 MIR6511B1 NTN3 RAB26 MIR3180-5 C16orf59 CCNF RNPS1 TBC1D24 LOC105371049 MIR6768 E4F1 SNORD60 MIR1225 PKD1 PDPK1 TRAF7 LOC652276 ATP6V0C LOC729652 TSC2 MIR3677 SNHG19 MIR6767 ABCA17P MIR3178 DNASE1L2 BRICD5 ECI1 AMDHD2 MIR4717 CEMP1 MIR940
nsv457351 Chr.16:2156590 - 2274302 on Build GRCh38 Loss PGP TRAF7 DNASE1L2 BRICD5 MLST8 LOC106660606 RNPS1 CASKIN1 ECI1 MIR3677 E4F1 MIR940
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion ABCA3 PGP TRAF7 MLST8 LOC106660606 CASKIN1 RAB26 MIR3677 SNHG19 DNASE1L2 BRICD5 RNPS1 ECI1 E4F1 SNORD60 MIR4717 MIR940

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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