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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:621121 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02706052_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 NP_001165439.1
NM_021924.4 NP_068743.2
NM_031264.3 NP_112554.2
XM_006718253.3 XP_006718316.1
XM_011520188.2 XP_011518490.1
XM_011520189.2 XP_011518491.1
XM_011520190.2 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 AAG16732.1
AF258676.1 AAG16733.1
AF276242.1 AAG30821.1
AF301909.1 AAG33495.1
AK000226.1 BAA91021.1
AK000384.1 BAA91130.1
AK300991.1
AK308040.1
AK309157.1
AY358368.1 AAQ88734.1
BC038405.1 AAH38405.1
DQ491193.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1523n54 Chr.11:557342 - 656940 on Build GRCh38 Gain RASSF7 LMNTD2 IRF7 PHRF1 LOC143666 CDHR5 SCT DEAF1 DRD4 MIR210HG MIR210
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss IRF7 CDHR5 SCT
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion RASSF7 LOC101059906 HRAS LMNTD2 IRF7 PHRF1 LOC143666 CDHR5 SCT LRRC56 MIR210HG MIR210
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PTDSS2 PANO1 CHID1 LOC171391 MUC6 LOC143666 CEND1 CDHR5 TOLLIP DEAF1 MUC5B DRD4 CRACR2B RASSF7 LOC101059906 LOC101927503 SLC25A22 IRF7 RPLP2 B4GALNT4 SIGIRR POLR2L RNH1 PKP3 MUC5AC TALDO1 HRAS EPS8L2 PIDD1 PDDC1 TMEM80 PNPLA2 TSPAN4 SNORA52 AP2A2 MUC2 CD151 MIR210 ANO9 LMNTD2 PHRF1 SCT LRRC56 MIR210HG MIR6744
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss IRF7 PHRF1 CDHR5 SCT DEAF1 DRD4
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PTDSS2 PANO1 CHID1 LOC171391 MUC6 LOC143666 CEND1 CDHR5 TOLLIP DEAF1 MUC5B DRD4 CRACR2B RASSF7 LOC101059906 LOC101927503 SLC25A22 IRF7 RPLP2 SIGIRR TOLLIP-AS1 POLR2L RNH1 MUC5AC TALDO1 HRAS EPS8L2 PIDD1 PDDC1 TMEM80 PNPLA2 TSPAN4 SNORA52 AP2A2 MUC2 CD151 MIR210 ANO9 LMNTD2 PHRF1 SCT LRRC56 MIR210HG MIR6744
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss IRF7 PHRF1 CDHR5 SCT DEAF1 DRD4
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain HRAS LOC143666 CDHR5 DEAF1 DRD4 MIR210 RASSF7 LMNTD2 IRF7 PHRF1 SCT LRRC56 MIR210HG
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PTDSS2 PANO1 CHID1 LOC171391 LOC143666 CEND1 CDHR5 DEAF1 DRD4 CRACR2B RASSF7 LOC101059906 SLC25A22 IRF7 RPLP2 B4GALNT4 SIGIRR POLR2L RNH1 PKP3 TALDO1 HRAS EPS8L2 PIDD1 PDDC1 TMEM80 PNPLA2 TSPAN4 SNORA52 AP2A2 CD151 MIR210 ANO9 LMNTD2 PHRF1 SCT LRRC56 MIR210HG
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain PTDSS2 HRAS LOC143666 CDHR5 DEAF1 DRD4 MIR210 RASSF7 LOC101059906 LMNTD2 IRF7 PHRF1 SCT RNH1 LRRC56 MIR210HG
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PTDSS2 PANO1 CHID1 LOC171391 LOC143666 CEND1 CDHR5 DEAF1 DRD4 CRACR2B RASSF7 LOC101059906 SLC25A22 IRF7 RPLP2 POLR2L RNH1 TALDO1 HRAS EPS8L2 PIDD1 PDDC1 TMEM80 PNPLA2 TSPAN4 SNORA52 CD151 MIR210 LMNTD2 PHRF1 SCT LRRC56 MIR210HG

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