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See other LOC100289580 CNV Assays ›
Gene Symbol
LOC100289580
Assay Reference Genome
Location

Chr.16:88733582 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02718049_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100289580

Gene Name:

 uncharacterized LOC100289580

Gene Aliases:

 -

Location:

 Chr.16:88731180-88741425 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100289580 NR_103774.1
AK294743.1

Target Gene Details

Entrez Gene ID:

 9780

Gene Name:

 piezo type mechanosensitive ion channel component 1

Gene Aliases:

 DHS, FAM38A, LMPH3, Mib

Location:

 Chr.16:88715338-88785220 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 18 - Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIEZO1 NM_001142864.3 NP_001136336.2
AB161230.1 BAF03565.1
BC150271.1
D87071.1 BAA13240.1
KC602455.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain ZNF778 TRAPPC2L LOC105371409 LOC100289580 APRT CDT1 LOC100129697 ACSF3 CDH15 CTU2 LOC400558 LOC339059 SLC22A31 LOC101927793 PIEZO1 CBFA2T3 MIR4722 GALNS LINC00304 PABPN1L LOC107987238
nsv471113 Chr.16:88650665 - 88764428 on Build GRCh38 Loss LOC100289580 CTU2 LOC339059 PIEZO1 SNAI3-AS1 MIR4722 CYBA RNF166 MVD SNAI3
nsv471114 Chr.16:88688461 - 88756339 on Build GRCh38 Gain LOC100289580 CTU2 LOC339059 PIEZO1 MIR4722 RNF166
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain LOC100289580 CTU2 LOC339059 PIEZO1 APRT SNAI3-AS1 MIR4722 CDT1 RNF166 GALNS SNAI3 LOC107987238
nsv517643 Chr.16:88713767 - 88756339 on Build GRCh38 Loss LOC100289580 CTU2 LOC339059 PIEZO1 MIR4722
nsv833327 Chr.16:88667431 - 88757621 on Build GRCh38 Loss LOC100289580 CTU2 LOC339059 PIEZO1 SNAI3-AS1 MIR4722 RNF166 SNAI3
nsv573673 Chr.16:88721265 - 88735362 on Build GRCh38 Loss LOC100289580 PIEZO1
nsv952070 Chr.16:88257295 - 88780192 on Build GRCh38 Deletion MIR5189 ZC3H18-AS1 ZC3H18 LOC100289580 CYBA MVD ZFPM1 ZNF469 IL17C CTU2 LOC339059 LOC107984862 PIEZO1 SNAI3-AS1 MIR4722 RNF166 SNAI3
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CPNE7 SPIRE2 LOC100289580 LOC107984817 CDK10 PRDM7 LOC105371414 GAS8 IL17C TCF25 CTU2 SNORD68 GALNS CHMP1A GAS8-AS1 LINC00304 SNAI3 TRAPPC2L LOC100287036 CENPBD1 LOC105371419 SPG7 CYBA MC1R MVD LOC100129697 ACSF3 CDH15 FAM157C AFG3L1P LOC339059 VPS9D1-AS1 LOC101927793 FANCA RPL13 ANKRD11 RNF166 URAHP LOC101927817 APRT DPEP1 CDT1 TUBB8P7 VPS9D1 LOC400558 PIEZO1 DEF8 DBNDD1 SNAI3-AS1 LOC107987238 ZNF778 LOC105371409 SPATA2L ZNF276 TUBB3 SPATA33 SLC22A31 CBFA2T3 MIR4722 PABPN1L
nsv1160442 Chr.16:88708161 - 88778524 on Build GRCh38 Deletion LOC100289580 CTU2 LOC339059 PIEZO1 MIR4722
nsv1927 Chr.16:88712585 - 88743583 on Build GRCh38 Insertion LOC100289580 CTU2 LOC339059 PIEZO1 MIR4722
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain TRAPPC2L LOC105371409 LOC100289580 APRT CDT1 LOC100129697 CTU2 LOC339059 LOC101927793 PIEZO1 CBFA2T3 MIR4722 GALNS PABPN1L LOC107987238

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