Hs02738879_cn

• Gene Symbol: SPARCL1
• Assay Reference Genome Location: Chr.4:87495062 on build GRCh38
• Cytoband: 4q22.1

Target Gene Details

• Entrez Gene ID: 8404
• Gene Name: SPARC like 1
• Gene Aliases: MAST 9, MAST9, PIG33, SC1
• Location: Chr.4:87473330-87529503 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPARCL1	NM_001128310.2	4	692	NP_001121782.1
	NM_001291976.1	4	699	NP_001278905.1
	NM_001291977.1			NP_001278906.1
	NM_004684.5	3	590	NP_004675.3
	AK294335.1	3	296
	AK298039.1	3	298
	AK300956.1	3	293
	AK304494.1
	AK304628.1
	AK316533.1	4	289
	AL833430.1	3	328
	AY513278.1	3	200	AAT08031.1
	BC033721.1	3	365	AAH33721.1
	BX647713.1
	DA283085.1	3	293
	DC403565.1
	X82157.1	3	317	CAA57650.1
	X86693.1	3	442	CAA60386.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3601276	Chr.4:87422870 - 87515781 on Build GRCh38	Loss	SPARCL1 NUDT9
esv3601278	Chr.4:87455460 - 87496054 on Build GRCh38	Loss	SPARCL1 NUDT9
nsv1002789	Chr.4:87318188 - 87685333 on Build GRCh38	Loss	DMP1 HSD17B13 SPARCL1 NUDT9 HSD17B11 DSPP

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

extracellular matrix glycoprotein

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding