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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147201312 on build GRCh38
Cytoband
1q21.1
Assay ID Hs02744463_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 7 1422 NP_001138301.1
NM_001144830.2 NP_001138302.1
NM_001461.3 7 1412 NP_001452.2
XM_005272946.4 7 1386 XP_005273003.1
XM_005272947.4 7 1130 XP_005273004.1
XM_005272948.4 7 1113 XP_005273005.1
XM_006711245.3 XP_006711308.1
XM_011509350.2 7 1417 XP_011507652.1
XM_011509351.2 6 1149 XP_011507653.1
XM_017000801.1 6 1161 XP_016856290.1
XM_017000802.1 6 931 XP_016856291.1
AK222728.1 7 1127 BAD96448.1
AK225739.1 7 1137
AK314647.1 7 1340
BC035687.1 AAH35687.1
L37080.1 7 1098 AAA67849.1
Z47553.1 7 1104 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss MIR6736 NUDT17 POLR3C NBPF14 RNVU1-8 LOC728989 LOC101927468 PIAS3 FMO5 NOTCH2NL LOC100996763 NUDT4P1 ANKRD34A NBPF11 RNU1-13P LINC01138 PDE4DIP BCL9 LOC105371242 NBPF13P CHD1L RNVU1-3 LOC100505824 LOC284561 GNRHR2 MIR5087 PDZK1 LOC105371226 NBPF10 RNVU1-6 GJA8 TXNIP LOC100132057 PEX11B LIX1L ITGA10 ACP6 GPR89A ANKRD35 HFE2 NUDT4P2 CD160 PDZK1P1 POLR3GL CH17-408M7.1 RNVU1-1 PDIA3P1 MIR6077 PRKAB2 HYDIN2 RBM8A RNVU1-7 NBPF12 GJA5 GPR89B LOC101928979 LINC00624 LOC100996517 PPIAL4G RNF115
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain LOC100132057 ACP6 NBPF14 RNVU1-8 LOC728989 LOC101927468 FMO5 NUDT4P2 PDZK1P1 NOTCH2NL CH17-408M7.1 LOC100996763 RNVU1-1 NUDT4P1 PDIA3P1 MIR6077 PRKAB2 NBPF11 RNU1-13P LINC01138 PDE4DIP HYDIN2 BCL9 LOC105371242 RNVU1-7 NBPF13P CHD1L RNVU1-3 NBPF12 LOC100505824 LOC284561 GJA5 MIR5087 LOC105371226 GPR89B LOC101928979 LINC00624 NBPF10 LOC100996517 PPIAL4G RNVU1-6 GJA8
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss LOC100132057 ACP6 NBPF14 RNVU1-8 LOC728989 LOC101927468 FMO5 NUDT4P2 PDZK1P1 NOTCH2NL CH17-408M7.1 LOC100996763 RNVU1-1 NUDT4P1 PDIA3P1 MIR6077 PRKAB2 NBPF11 RNU1-13P LINC01138 PDE4DIP HYDIN2 BCL9 LOC105371242 RNVU1-7 NBPF13P CHD1L RNVU1-3 NBPF12 LOC100505824 LOC284561 GJA5 MIR5087 LOC105371226 GPR89B LINC00624 NBPF10 LOC100996517 PPIAL4G GJA8
nsv1077657 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion PRKAB2 LOC728989 FMO5 NBPF13P RNVU1-8 PDIA3P1 CHD1L
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion TXNIP LOC100132057 LIX1L ACP6 NBPF14 RNVU1-8 LOC728989 LOC101927468 HFE2 FMO5 NUDT4P2 PDZK1P1 NOTCH2NL POLR3GL CH17-408M7.1 LOC100996763 RNVU1-1 NUDT4P1 ANKRD34A PDIA3P1 MIR6077 PRKAB2 NBPF11 RNU1-13P LINC01138 PDE4DIP HYDIN2 BCL9 LOC105371242 RNVU1-7 NBPF13P CHD1L RNVU1-3 NBPF12 LOC100505824 LOC284561 GJA5 MIR5087 LOC105371226 GPR89B LOC101928979 LINC00624 NBPF10 LOC100996517 PPIAL4G RNVU1-6 GJA8
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication LOC100132057 ACP6 NBPF14 RNVU1-8 LOC728989 LOC101927468 FMO5 NUDT4P2 PDZK1P1 NOTCH2NL CH17-408M7.1 LOC100996763 RNVU1-1 NUDT4P1 PDIA3P1 MIR6077 PRKAB2 NBPF11 RNU1-13P LINC01138 PDE4DIP HYDIN2 BCL9 LOC105371242 RNVU1-7 NBPF13P CHD1L RNVU1-3 NBPF12 LOC100505824 LOC284561 GJA5 MIR5087 LOC105371226 GPR89B LINC00624 LOC100996517 PPIAL4G GJA8
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain LOC100132057 ACP6 NBPF14 RNVU1-8 LOC728989 LOC101927468 FMO5 NUDT4P2 PDZK1P1 NOTCH2NL CH17-408M7.1 LOC100996763 RNVU1-1 NUDT4P1 PDIA3P1 MIR6077 PRKAB2 NBPF11 RNU1-13P LINC01138 PDE4DIP HYDIN2 BCL9 LOC105371242 RNVU1-7 NBPF13P CHD1L RNVU1-3 NBPF12 LOC100505824 LOC284561 GJA5 MIR5087 LOC105371226 GPR89B LOC101928979 LINC00624 NBPF10 LOC100996517 PPIAL4G RNVU1-6 GJA8
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion LOC100132057 ACP6 NBPF14 RNVU1-8 LOC728989 LOC101927468 FMO5 NUDT4P2 PDZK1P1 NOTCH2NL CH17-408M7.1 LOC100996763 RNVU1-1 NUDT4P1 PDIA3P1 MIR6077 PRKAB2 NBPF11 RNU1-13P LINC01138 PDE4DIP HYDIN2 BCL9 NBPF9 LOC105371242 RNVU1-7 NBPF13P CHD1L RNVU1-3 NBPF12 LOC100505824 LOC284561 GJA5 MIR5087 LOC105371226 GPR89B LOC101928979 LINC00624 NBPF10 LOC100996517 PPIAL4G GJA8
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss PRKAB2 FMO5 PDIA3P1 CHD1L

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