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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1296064 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02768663_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Within Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 17 1527 NP_085152.2
XM_005244715.2 17 1563 XP_005244772.1
XM_005244717.3 5 521 XP_005244774.1
XM_011540606.2 17 1576 XP_011538908.1
XM_011540607.1 17 4000 XP_011538909.1
XM_011540608.2 16 1481 XP_011538910.1
XM_011540609.2 17 1577 XP_011538911.1
XM_017000233.1 17 1716 XP_016855722.1
AB051503.1 16 3192 BAB21807.1
AF411981.1 15 1327 AAL04165.1
AK093954.1 BAC04257.1
BC004874.2 2 131 AAH04874.2
BC051194.1 17 1527 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss SCNN1D ACAP3 UBE2J2 MIR6726
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss FNDC10 FAM41C ISG15 LOC100132287 ANKRD65 MIR200A LOC102724312 MIR200B PUSL1 SSU72 FAAP20 LOC107984841 SLC35E2 MXRA8 LOC105378591 MIR6808 GABRD TNFRSF18 ATAD3A LOC100288175 MMP23A HES4 SKI OR4F5 LINC01128 WASH7P TAS1R3 TMEM240 LOC102725121 LOC105378948 MTND2P28 MIR1302-2 LOC100134822 PERM1 LOC100129534 CDK11B KLHL17 PLEKHN1 SAMD11 CALML6 NADK MTND1P23 CPTP OR4F29 FAM132A LOC105378592 C1orf159 LOC101928626 LOC105378949 LOC107985728 RNF223 TTLL10-AS1 MMP23B AURKAIP1 LOC284600 LOC100506504 MIR6723 MIR6859-2 MIR6859-1 FAM87B OR4F16 LINC01342 LOC148413 CFAP74 MORN1 TMEM52 MIR429 LOC107985729 ATAD3C LOC100287934 LOC105378589 TNFRSF4 MIR6727 CPSF3L MRPL20 LOC100133331 GNB1 FAM138A LOC100288069 DVL1 B3GALT6 CCNL2 NOC2L PRKCZ SCNN1D ACAP3 DDX11L1 MIB2 VWA1 LINC00115 SLC35E2B LOC100130417 LOC105378947 CDK11A MIR6726 SDF4 TTLL10 AGRN LOC729737 UBE2J2 TMEM88B ATAD3B
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss B3GALT6 SCNN1D FAM132A ACAP3 UBE2J2 MIR6726 SDF4
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss CPTP DVL1 ACAP3 MIR6727 MIR6726 PUSL1 CPSF3L TAS1R3 MIR6808
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss SCNN1D ACAP3 MIR6726
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TNFRSF18 RNF223 TTLL10-AS1 MIR200B MIR6726 SDF4 TTLL10 B3GALT6 MIR429 SCNN1D TNFRSF4 FAM132A ACAP3 UBE2J2 LINC01342 C1orf159 MIR200A
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TNFRSF18 LOC100288175 RNF223 TTLL10-AS1 TAS1R3 B3GALT6 LOC105378948 SCNN1D ACAP3 LINC01342 MIR200A MIR200B MIR6726 PUSL1 SDF4 TTLL10 AGRN MIR429 CPTP TNFRSF4 FAM132A UBE2J2 MIR6727 C1orf159 CPSF3L
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion CPTP DVL1 SCNN1D AURKAIP1 ACAP3 MIR6727 MXRA8 MIR6726 PUSL1 CPSF3L TAS1R3 MIR6808
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC107985728 RNF223 TTLL10-AS1 MMP23B AURKAIP1 LOC284600 FNDC10 FAM41C FAM87B ISG15 LINC01342 ANKRD65 MIR200A LOC148413 LOC102724312 MIR200B PUSL1 SSU72 MIR429 LOC107985729 ATAD3C LOC100287934 TNFRSF4 MIR6727 SLC35E2 MXRA8 CPSF3L MIR6808 MRPL20 TNFRSF18 ATAD3A LOC100288175 MMP23A HES4 LOC100288069 DVL1 LINC01128 TAS1R3 B3GALT6 CCNL2 NOC2L TMEM240 LOC105378948 SCNN1D ACAP3 MIB2 PERM1 VWA1 LINC00115 SLC35E2B LOC100130417 CDK11A CDK11B KLHL17 PLEKHN1 MIR6726 SAMD11 NADK SDF4 TTLL10 AGRN CPTP FAM132A UBE2J2 TMEM88B C1orf159 ATAD3B
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion TNFRSF18 ATAD3A DVL1 TTLL10-AS1 MMP23B AURKAIP1 FNDC10 TAS1R3 B3GALT6 CCNL2 TMEM240 SCNN1D ACAP3 LINC01342 ANKRD65 MIR200A MIB2 VWA1 LOC148413 LOC102724312 MIR200B CDK11B MIR6726 PUSL1 SDF4 TTLL10 SSU72 MIR429 LOC107985729 ATAD3C CPTP TNFRSF4 FAM132A UBE2J2 MIR6727 MXRA8 TMEM88B C1orf159 CPSF3L ATAD3B MIR6808 MRPL20
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain CPTP DVL1 SCNN1D ACAP3 MIR6727 MXRA8 MIR6726 PUSL1 CPSF3L TAS1R3 MIR6808
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss DVL1 AURKAIP1 MIR6726 PUSL1 TAS1R3 CPTP SCNN1D ACAP3 UBE2J2 MIR6727 MXRA8 CPSF3L MIR6808
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain TNFRSF18 LOC100288175 LOC107985728 RNF223 HES4 DVL1 TTLL10-AS1 AURKAIP1 LOC284600 TAS1R3 B3GALT6 CCNL2 NOC2L LOC105378948 ISG15 SCNN1D ACAP3 LINC01342 ANKRD65 MIR200A PERM1 LOC148413 LOC100130417 MIR200B KLHL17 PLEKHN1 MIR6726 PUSL1 SAMD11 SDF4 TTLL10 AGRN MIR429 CPTP TNFRSF4 FAM132A UBE2J2 MIR6727 MXRA8 TMEM88B C1orf159 CPSF3L MIR6808 MRPL20
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain TNFRSF18 TTLL10-AS1 MIR200B MIR6726 PUSL1 SDF4 TTLL10 B3GALT6 MIR429 SCNN1D TNFRSF4 FAM132A ACAP3 UBE2J2 MIR6727 CPSF3L MIR200A

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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