Genomic Map
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Target Gene Details
Entrez Gene ID: | 2972 |
Gene Name: | BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit |
Gene Aliases: |
BRF, BRF-1, CFDS, GTF3B, HEL-S-76p, TAF3B2, TAF3C, TAFIII90, TF3B90, TFIIIB90, hBRF |
Location: |
Chr.14:105209286-105315577 on Build GRCh38 |
Assay Gene Location: | Within Exon 22 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| BRF1 | NM_001242786.1 | 18 | 2706 | NP_001229715.1 |
| NM_001242787.1 | 18 | 2640 | NP_001229716.1 | |
| NM_001242788.1 | 17 | 2850 | NP_001229717.1 | |
| NM_001242789.1 | 13 | 2130 | NP_001229718.1 | |
| NM_001519.3 | 18 | 2931 | NP_001510.2 | |
| NM_145685.2 | 14 | 2839 | NP_663718.1 | |
| XM_005267561.3 | 18 | 2950 | XP_005267618.1 | |
| XM_005267563.3 | 14 | 3643 | XP_005267620.1 | |
| XM_006720123.2 | 13 | 3071 | XP_006720186.1 | |
| XM_011536673.1 | 17 | 2803 | XP_011534975.1 | |
| XM_011536674.1 | 14 | 3221 | XP_011534976.1 | |
| AJ297406.1 | CAC04512.1 | |||
| AJ297407.1 | 14 | 2847 | CAC04513.1 | |
| AK096471.1 | 13 | 2130 | ||
| AK124665.1 | 8 | 1995 | ||
| AK125024.1 | 5 | 2445 | BAC86024.1 | |
| AK126499.1 | 1 | 2940 | ||
| BC071637.1 | 13 | 1995 | AAH71637.1 | |
| BC086856.1 | 17 | 2583 | AAH86856.1 | |
| BC103859.1 | AAI03860.1 | |||
| BC103860.2 | AAI03861.1 | |||
| BC103861.2 | AAI03862.1 | |||
| BC133655.1 | ||||
| U28838.1 | 18 | 2928 | AAC50170.1 | |
| U75276.1 | 18 | 2635 | AAB38876.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2760014 | Chr.14:105047009 - 105483089 on Build GRCh38 | Loss |
 LOC100507437
PACS2
MTA1
MIR6765
BRF1
JAG2
NUDT14
TEX22
LOC102723354
GPR132
CRIP2
BTBD6
|
| nsv566186 | Chr.14:105209364 - 105312968 on Build GRCh38 | Loss |
PACS2
BRF1
BTBD6
|
| nsv470679 | Chr.14:105124547 - 105605978 on Build GRCh38 | Loss |
LOC100507437
LOC105370697
MIR6765
BTBD6
IGHA2
PACS2
C14orf80
MTA1
BRF1
IGH
JAG2
NUDT14
TEX22
CRIP1
CRIP2
TMEM121
|
| nsv510651 | Chr.14:105190545 - 105258818 on Build GRCh38 | Deletion |
BRF1
BTBD6
|
| nsv9175 | Chr.14:105030172 - 105222604 on Build GRCh38 | Gain |
MIR6765
BRF1
JAG2
NUDT14
LOC102723354
GPR132
|
| nsv952279 | Chr.14:105136864 - 105237863 on Build GRCh38 | Deletion |
MIR6765
BRF1
JAG2
NUDT14
|
| dgv267n27 | Chr.14:105149311 - 105219528 on Build GRCh38 | Loss |
MIR6765
BRF1
JAG2
NUDT14
|
| nsv566185 | Chr.14:105194429 - 105219528 on Build GRCh38 | Loss |
BRF1
|
| nsv1054574 | Chr.14:103210111 - 105365114 on Build GRCh38 | Loss |
C14orf180
SNORA28
MIR6765
KIF26A
LOC105370691
TDRD9
CEP170B
C14orf2
PACS2
APOPT1
LOC107984648
KLC1
LOC388022
JAG2
NUDT14
C14orf79
LOC102723354
ADSSL1
LOC101929634
MIR203B
AHNAK2
ZBTB42
LOC105370708
AKT1
CKB
EIF5
XRCC3
CDCA4
LOC105370687
LOC105378183
ZFYVE21
MARK3
SIVA1
GPR132
TMEM179
LINC00637
PPP1R13B
BTBD6
LINC00638
MIR203A
TRMT61A
BAG5
BRF1
RD3L
PLD4
INF2
ASPG
MIR4710
|
| nsv1052190 | Chr.14:104957424 - 105256316 on Build GRCh38 | Gain |
AHNAK2
CDCA4
MIR6765
BRF1
JAG2
NUDT14
C14orf79
LOC102723354
GPR132
BTBD6
|
| nsv456458 | Chr.14:104969312 - 105223755 on Build GRCh38 | Loss |
AHNAK2
CDCA4
MIR6765
BRF1
JAG2
NUDT14
C14orf79
LOC102723354
GPR132
|
| nsv517055 | Chr.14:105136282 - 106779068 on Build GRCh38 | Gain+Loss |
MIR6765
LOC107987211
ELK2AP
IGHV3-23
IGHM
IGHV4-31
PACS2
IGHV4-55
C14orf80
MTA1
MIR4538
JAG2
NUDT14
TEX22
IGHD
MIR8071-1
IGHV3-48
IGHG1
IGHG3
LOC100507437
LOC105370697
ADAM6
IGHV3-69-1
IGHA1
IGHG2
BTBD6
IGHV3-30
MIR8071-2
MIR4539
IGHA2
IGHG4
BRF1
IGHV3-71
IGH
IGHV1-69
MIR4537
CRIP1
CRIP2
LINC00221
TMEM121
MIR4507
KIAA0125
LINC00226
IGHV3-41
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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