Hs02830753_cn

• Gene Symbol: LOC101926905
• Assay Reference Genome Location: Chr.5:141053723 on build GRCh38
• Cytoband: 5q31.3

Target Gene Details

• Entrez Gene ID: 101926905
• Gene Name: uncharacterized LOC101926905
• Gene Aliases: -
• Location: Chr.5:141046205-141078031 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101926905	NR_105056.2
	BG193185.1
	HY003594.1
	HY010779.1

Target Gene Details

• Entrez Gene ID: 29930
• Gene Name: protocadherin beta 1
• Gene Aliases: PCDH-BETA1
• Location: Chr.5:141051376-141053962 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHB1	NM_013340.3	1	2348	NP_037472.2
	AF152488.1	1	2253	AAD43749.1
	BC112096.1	1	2348	AAI12097.1
	BC112098.1	1	2348	AAI12099.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2759382	Chr.5:140777355 - 141449115 on Build GRCh38	Gain	LOC101926905 PCDHA10 PCDHGA7 PCDHB15 PCDHA3 PCDHB13 PCDHA9 PCDHGB6 PCDHA11 PCDHB10 PCDHGA11 PCDHGA4 PCDHAC2 PCDHGB3 PCDHB6 PCDHB7 PCDHGA12 PCDHA8 PCDHGB1 PCDHB16 PCDHA7 PCDHB9 PCDHB3 PCDHGA5 PCDHB2 PCDHB18P PCDHGB2 PCDHB4 PCDHB17P PCDHB12 PCDHGA9 PCDHGB8P PCDHB14 PCDHA6 PCDHA13 TAF7 PCDHGA1 PCDHB19P PCDHA1 PCDHAC1 PCDHB5 PCDHA5 PCDHA2 PCDHB11 PCDHGA10 PCDHA12 PCDHGA3 PCDHGB7 PCDHGA8 PCDHA4 PCDHB8 PCDHGA2 PCDHGB5 PCDHGA6 PCDHGB4 SLC25A2 PCDHB1
nsv428127	Chr.5:141016768 - 141319173 on Build GRCh38	Loss	LOC101926905 PCDHB14 TAF7 PCDHB19P PCDHB16 PCDHB15 PCDHB13 PCDHB9 PCDHB5 PCDHB3 PCDHB2 PCDHB18P SLC25A2 PCDHB4 PCDHB10 PCDHB17P PCDHB11 PCDHB1 PCDHB6 PCDHB12 PCDHB7 PCDHB8
nsv818387	Chr.5:141040406 - 141056478 on Build GRCh38	Gain	LOC101926905 PCDHB1

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

homophilic cell adhesion via plasma membrane adhesion molecules

Function(s)

calcium ion binding