Name: [Hs02839363_cn] [CASP4]
Creator: Thermo Fisher Scientific
Keywords: [CASP4] Assay, [caspase 4] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	837
Gene Name:	caspase 4
Gene Aliases:	ICE(rel)II, ICEREL-II, ICH-2, Mih1, Mih1/TX, TX
Location:	Chr.11:104942866-104968598 on Build GRCh38
Assay Gene Location:	Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CASP4	NM_001225.3	2	129	NP_001216.1
	NM_033306.2	2	162	NP_150649.1
	XM_011543019.1	2	127	XP_011541321.1
	XM_017018397.1	2	71	XP_016873886.1
	AK057094.1	2	967
	AK225751.1	2	97
	AK296081.1	2	106
	AK304222.1	2	112
	BC017839.1	2	95	AAH17839.1
	CN261701.1	2	158
	U25804.1	2	104	AAA86890.1
	U28014.1	2	93	AAA75171.1
	U28976.1	2	89	AAC99850.1
	U28977.1	2	162	AAC99851.1
	U28978.1	2	162	AAC99852.1
	U28979.1	2	79	AAC99854.1
	Z48810.1	2	97	CAA88750.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1040784	Chr.11:104893070 - 104985151 on Build GRCh38	Loss	LOC643733 CASP4 CASP12
nsv1052674	Chr.11:104111970 - 107043401 on Build GRCh38	Loss	LOC105369473 MIR7641-1 CARD16 MSANTD4 CARD17 GRIA4 CASP1 PDGFD AASDHPPT CARD18 CASP5 KBTBD3 LOC101928535 GUCY1A2 CASP1P2 LOC643733 CASP4 LOC102723895 CASP12
esv2750978	Chr.11:104094062 - 105475331 on Build GRCh38	Gain	MIR7641-1 CARD18 CASP5 CARD16 CARD17 CASP1 CASP1P2 LOC643733 PDGFD CASP4 LOC102723895 CASP12
nsv1046098	Chr.11:104336482 - 105132934 on Build GRCh38	Loss	CASP5 CARD16 CARD17 CASP1 CASP1P2 LOC643733 CASP4 LOC102723895 CASP12
nsv1041081	Chr.11:104927048 - 105041731 on Build GRCh38	Loss	CASP5 CARD16 CASP1 CASP4
nsv468862	Chr.11:104903287 - 105372644 on Build GRCh38	Gain	CARD18 CASP5 CARD16 CARD17 CASP1 CASP1P2 LOC643733 CASP4
nsv832255	Chr.11:104804191 - 104976234 on Build GRCh38	Loss	LOC643733 CASP4 CASP12
nsv1038877	Chr.11:104166130 - 105422422 on Build GRCh38	Gain	MIR7641-1 CARD18 CASP5 CARD16 CARD17 CASP1 CASP1P2 LOC643733 CASP4 LOC102723895 CASP12

Intragenic

Exonic

DGV Variation

protease

Function(s) Process(es)