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See other PPP1R13B CNV Assays ›
Gene Symbol
PPP1R13B
Assay Reference Genome
Location

Chr.14:103734472 on build GRCh38
Cytoband
14q32.33
Assay ID Hs02854056_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 23368

Gene Name:

 protein phosphatase 1 regulatory subunit 13B

Gene Aliases:

 ASPP1, p53BP2-like, p85

Location:

 Chr.14:103733751-103848967 on Build GRCh38

Assay Gene Location:

 Within Exon 22
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPP1R13B NM_015316.2 17 4238 NP_056131.2
XM_005267487.4 17 4642 XP_005267544.1
XM_011536593.2 18 4747 XP_011534895.1
XM_017021116.1 18 4384 XP_016876605.1
XM_017021117.1 18 4160 XP_016876606.1
XM_017021118.1 18 4073 XP_016876607.1
XM_017021119.1 12 3367 XP_016876608.1
AB018314.1 13 3529 BAA34491.1
AJ318887.2 17 4113 CAC83011.2
AK021580.1 3 1013
AK023188.1 8 2754
AK125374.1 2 2417
BC136527.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv470673 Chr.14:103695926 - 103753612 on Build GRCh38 Loss LOC107984648 ZFYVE21 KLC1 PPP1R13B XRCC3
nsv1054574 Chr.14:103210111 - 105365114 on Build GRCh38 Loss INF2 LOC388022 LOC102723354 TDRD9 SNORA28 AKT1 LOC105378183 CKB LINC00637 GPR132 MIR4710 ADSSL1 APOPT1 LOC105370708 BRF1 PACS2 C14orf2 MARK3 LINC00638 MIR203B ZBTB42 CDCA4 PLD4 SIVA1 XRCC3 ASPG LOC107984648 ZFYVE21 C14orf79 LOC101929634 EIF5 MIR6765 AHNAK2 KLC1 MIR203A PPP1R13B BTBD6 NUDT14 BAG5 C14orf180 KIF26A LOC105370687 TMEM179 JAG2 CEP170B TRMT61A LOC105370691 RD3L
esv2760013 Chr.14:103681188 - 103946476 on Build GRCh38 Loss LOC107984648 ZFYVE21 TDRD9 C14orf2 KLC1 PPP1R13B LINC00637 RD3L XRCC3

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More Information


Additional Information:

For this assay, SNP(s) [rs117781354] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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