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See other P2RX6 CNV Assays ›
Gene Symbol
P2RX6
Assay Reference Genome
Location

Chr.22:21014162 on build GRCh38
Cytoband
22q11.21
Assay ID Hs02891026_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9127

Gene Name:

 purinergic receptor P2X 6

Gene Aliases:

 P2RXL1, P2X6, P2XM

Location:

 Chr.22:21009699-21028013 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
P2RX6 XM_017029075.1 XP_016884564.1

Target Gene Details

Entrez Gene ID:

 113691

Gene Name:

 tubulin alpha 3f pseudogene

Gene Aliases:

 -

Location:

 Chr.22:21008203-21014287 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TUBA3FP NR_003608.1 1 126
AK057257.1 1 78
AK315686.1 1 74
BI668929.1 1 134
CN368433.1 1 103

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv7994n54 Chr.22:20559470 - 21111491 on Build GRCh38 Gain LOC101928891 AIFM3 THAP7-AS1 TMEM191A SMPD4P1 SERPIND1 MED15 LRRC74B TUBA3FP P2RX6P POM121L4P THAP7 MIR649 BCRP2 SLC7A4 LZTR1 SNAP29 PI4KA CRKL P2RX6
nsv1065617 Chr.22:20705383 - 21111546 on Build GRCh38 Gain LOC101928891 AIFM3 THAP7-AS1 SERPIND1 LRRC74B TUBA3FP P2RX6P THAP7 MIR649 BCRP2 SLC7A4 LZTR1 SNAP29 PI4KA CRKL P2RX6
esv3893441 Chr.22:20733858 - 21135629 on Build GRCh38 Gain+Loss LOC101928891 AIFM3 THAP7-AS1 SERPIND1 LRRC74B TUBA3FP P2RX6P THAP7 MIR649 BCRP2 SLC7A4 LZTR1 SNAP29 PI4KA CRKL P2RX6
nsv471185 Chr.22:20977267 - 21033678 on Build GRCh38 Loss SLC7A4 AIFM3 LZTR1 THAP7-AS1 P2RX6 TUBA3FP THAP7
nsv834142 Chr.22:20979844 - 21170235 on Build GRCh38 Gain BCRP2 FAM230B SLC7A4 AIFM3 LZTR1 THAP7-AS1 P2RX6 LRRC74B TUBA3FP P2RX6P THAP7 MIR649
nsv834141 Chr.22:20859455 - 21051952 on Build GRCh38 Loss LOC101928891 AIFM3 THAP7-AS1 LRRC74B TUBA3FP P2RX6P THAP7 MIR649 SLC7A4 LZTR1 SNAP29 CRKL P2RX6
nsv828961 Chr.22:20980653 - 21023359 on Build GRCh38 Gain AIFM3 LZTR1 THAP7-AS1 P2RX6 TUBA3FP THAP7
esv2763693 Chr.22:20581182 - 21111546 on Build GRCh38 Gain LOC101928891 AIFM3 THAP7-AS1 TMEM191A SMPD4P1 SERPIND1 MED15 LRRC74B TUBA3FP P2RX6P POM121L4P THAP7 MIR649 BCRP2 SLC7A4 LZTR1 SNAP29 PI4KA CRKL P2RX6
nsv3563 Chr.22:21012779 - 21057225 on Build GRCh38 Deletion SLC7A4 P2RX6 LRRC74B TUBA3FP P2RX6P MIR649
esv3647305 Chr.22:20902577 - 21081487 on Build GRCh38 Gain LOC101928891 SLC7A4 AIFM3 LZTR1 THAP7-AS1 CRKL P2RX6 LRRC74B TUBA3FP P2RX6P THAP7 MIR649
nsv1062280 Chr.22:20963144 - 21028993 on Build GRCh38 Gain LOC101928891 SLC7A4 AIFM3 LZTR1 THAP7-AS1 P2RX6 TUBA3FP THAP7
esv3647308 Chr.22:21008293 - 21023987 on Build GRCh38 Loss THAP7-AS1 P2RX6 TUBA3FP
nsv588305 Chr.22:20721841 - 21108064 on Build GRCh38 Loss LOC101928891 AIFM3 THAP7-AS1 SERPIND1 LRRC74B TUBA3FP P2RX6P THAP7 MIR649 BCRP2 SLC7A4 LZTR1 SNAP29 PI4KA CRKL P2RX6
esv2678175 Chr.22:20691629 - 21284480 on Build GRCh38 Deletion LOC101928891 AIFM3 THAP7-AS1 TMEM191A SERPIND1 LRRC74B TUBA3FP P2RX6P POM121L4P THAP7 MIR649 BCRP2 FAM230B SLC7A4 GGT2 LZTR1 SNAP29 PI4KA CRKL P2RX6 POM121L8P
nsv436864 Chr.22:20346736 - 21559130 on Build GRCh38 Insertion LOC101927859 LOC101928891 AIFM3 THAP7-AS1 SERPIND1 LRRC74B KLHL22 HIC2 POM121L4P LOC100996335 MIR649 BCRP2 RIMBP3B FAM230B SLC7A4 ZNF74 LZTR1 RIMBP3C SCARF2 POM121L8P TMEM191A SMPD4P1 USP41 MED15 PI4KAP2 TUBA3FP P2RX6P THAP7 TMEM191C GGT2 SNAP29 PI4KA CRKL P2RX6 UBE2L3
dgv4483n100 Chr.22:20362634 - 21212930 on Build GRCh38 Gain LOC101928891 AIFM3 THAP7-AS1 SERPIND1 LRRC74B KLHL22 POM121L4P MIR649 BCRP2 FAM230B SLC7A4 ZNF74 LZTR1 SCARF2 TMEM191A SMPD4P1 USP41 MED15 TUBA3FP P2RX6P THAP7 GGT2 SNAP29 PI4KA CRKL P2RX6
esv3647307 Chr.22:21006311 - 21015449 on Build GRCh38 Loss THAP7-AS1 P2RX6 TUBA3FP
nsv523162 Chr.22:20389246 - 21108064 on Build GRCh38 Loss LOC101928891 AIFM3 THAP7-AS1 TMEM191A SMPD4P1 SERPIND1 USP41 MED15 LRRC74B TUBA3FP KLHL22 P2RX6P POM121L4P THAP7 MIR649 BCRP2 SLC7A4 ZNF74 LZTR1 SNAP29 PI4KA CRKL P2RX6 SCARF2
nsv828960 Chr.22:20953775 - 21057148 on Build GRCh38 Loss LOC101928891 SLC7A4 AIFM3 LZTR1 THAP7-AS1 P2RX6 LRRC74B TUBA3FP P2RX6P THAP7 MIR649

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More Information


Additional Information:

For this assay, SNP(s) [rs559472588] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ligand-gated ion channel

Gene Ontology Categories:

Function(s) Process(es)


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