Genomic Map
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Target Gene Details
Entrez Gene ID: | 145748 |
Gene Name: | LysM domain containing 4 |
Gene Aliases: |
- |
Location: |
Chr.15:99715033-99733561 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| LYSMD4 | NM_001284417.1 | 3 | 466 | NP_001271346.1 |
| NM_001284418.1 | 3 | 467 | NP_001271347.1 | |
| NM_001284419.1 | 5 | 542 | NP_001271348.1 | |
| NM_001284420.1 | 2 | 176 | NP_001271349.1 | |
| NM_001284421.1 | 4 | 492 | NP_001271350.1 | |
| NM_001284422.1 | 5 | 592 | NP_001271351.1 | |
| NM_152449.3 | 6 | 657 | NP_689662.2 | |
| XM_006720397.3 | 2 | 190 | XP_006720460.2 | |
| XM_011521241.1 | 2 | 250 | XP_011519543.1 | |
| XM_011521242.2 | 2 | 768 | XP_011519544.1 | |
| XM_011521243.2 | 2 | 768 | XP_011519545.1 | |
| XM_011521244.1 | 3 | 819 | XP_011519546.1 | |
| XM_011521245.2 | 2 | 190 | XP_011519547.1 | |
| XM_017021926.1 | 4 | 683 | XP_016877415.1 | |
| XM_017021927.1 | 3 | 1004 | XP_016877416.1 | |
| XM_017021928.1 | 2 | 648 | XP_016877417.1 | |
| XM_017021929.1 | 4 | 845 | XP_016877418.1 | |
| XM_017021930.1 | 4 | 859 | XP_016877419.1 | |
| AK056718.1 | ||||
| AK057570.1 | BAB71528.1 | |||
| AK124852.1 | 4 | 795 | ||
| AK290296.1 | 3 | 452 | ||
| BC041097.1 | 6 | 634 | ||
| BC084545.1 | 3 | 434 | AAH84545.1 | |
| BG420645.1 | 3 | 422 | ||
| BX640928.1 | CAE45966.1 | |||
| CB989579.1 | 4 | 483 | ||
| DA405564.1 | ||||
| DA594971.1 | 2 | 150 | ||
| DB044672.1 | ||||
| HY131530.1 | 3 | 203 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv4769n54 | Chr.15:99700705 - 100224933 on Build GRCh38 | Gain |
 LOC400464
LOC105371022
MEF2A
ADAMTS17
DNM1P46
LYSMD4
|
| esv3637430 | Chr.15:99708759 - 100311912 on Build GRCh38 | Gain |
LOC400464
LOC105371022
MEF2A
ADAMTS17
DNM1P46
LYSMD4
|
| nsv428313 | Chr.15:99695998 - 100216834 on Build GRCh38 | Gain |
LOC400464
LOC105371022
MEF2A
ADAMTS17
DNM1P46
LYSMD4
|
| nsv1045838 | Chr.15:99702862 - 100492013 on Build GRCh38 | Gain |
SPATA41
LOC400464
LOC105371022
MEF2A
ADAMTS17
CERS3-AS1
CERS3
DNM1P46
LYSMD4
|
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Additional Information:
For this assay, SNP(s) [rs78073940] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
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