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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1775403 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02938543_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 5 - Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 NP_001244299.1
XM_017023025.1 XP_016878514.1
XM_017023026.1 XP_016878515.1
AK074080.2 BAB84906.2
EF452422.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571169 Chr.16:1729694 - 1789022 on Build GRCh38 Loss NME3 EME2 SPSB3 MAPK8IP3 MIR3177 MRPS34 NUBP2
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication CCDC154 CEMP1 MIR3677 MPG LOC105371184 FLJ42627 NOXO1 METRN TBC1D24 LOC652276 MIR3176 TELO2 EME2 PDPK1 WDR24 SPSB3 POLR3K MIR1225 CACNA1H IFT140 LOC729652 LMF1 TMEM204 RNPS1 TBL3 CAPN15 LMF1-AS1 HAGH PRR25 RHBDF1 CCNF DECR2 LOC105371049 MSRB1 MIR4717 LOC107987233 MIR4516 E4F1 SNHG19 AXIN1 MIR940 MIR6767 RPL3L DDX11L10 LOC105371046 TMEM8A SOX8 SNRNP25 SYNGR3 CHTF18 RGS11 TSR3 NPRL3 SLC9A3R2 MAPK8IP3 NDUFB10 MRPS34 LOC107984876 PIGQ MIR6511B1 SNORA78 MRPL28 CLCN7 MIR662 LOC100287175 TPSB2 SSTR5-AS1 ZNF598 TPSG1 SSTR5 UBE2I LUC7L LOC105371038 HS3ST6 BRICD5 JMJD8 RAB11FIP3 CRAMP1 PKD1 C16orf91 METTL26 LINC00254 LOC105371045 GNPTG TRAF7 SNORD60 SNHG9 WDR90 PRSS27 UNKL WFIKKN1 SNORA64 SNORA10 CCDC78 NARFL ERVK13-1 FAM234A RPL23AP5 ATP6V0C C16orf59 HBM PDIA2 STUB1 NTN3 GFER PTX4 NUBP2 FAM173A LOC101929280 FAHD1 MLST8 RHBDL1 TSC2 RPUSD1 NME4 MIR3178 ARHGDIG ABCA17P WASIR2 MIR6768 AMDHD2 PGP NTHL1 LOC105371047 TPSD1 ECI1 HBZ C1QTNF8 ABCA3 NME3 RHOT2 FBXL16 IGFALS HBA2 GNG13 MIR3177 LINC00235 RAB40C MIR6859-4 CASKIN1 MSLN MEIOB PRR35 MCRIP2 LOC100134368 RPS2 HBA1 BAIAP3 NPW RNF151 DNASE1L2 MIR5587 KCTD5 PRSS29P TPSAB1 HN1L NHLRC4 LOC106660606 HAGHL RAB26 HBQ1 MIR3180-5
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss NME3 EME2 IGFALS SPSB3 MAPK8IP3 MRPS34 HAGH NUBP2
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion NME3 EME2 IGFALS SPSB3 MAPK8IP3 MIR3177 MRPS34 NUBP2
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss NME3 EME2 IGFALS SPSB3 MAPK8IP3 MRPS34 NUBP2
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss IFT140 LOC105371046 CRAMP1 HAGH NUBP2 NME3 EME2 HN1L IGFALS SPSB3 MAPK8IP3 MIR3177 MRPS34
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss NME3 EME2 IGFALS SPSB3 MAPK8IP3 MRPS34 NUBP2
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss IFT140 LOC105371046 MEIOB TMEM204 CRAMP1 HAGH LOC105371047 NUBP2 FAHD1 NME3 TELO2 EME2 HN1L IGFALS SPSB3 MAPK8IP3 MIR3177 MRPS34
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain NME3 EME2 IGFALS SPSB3 MAPK8IP3 MRPS34 NUBP2
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss NME3 EME2 SPSB3 MAPK8IP3 MRPS34
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss MEIOB CRAMP1 HAGH NUBP2 FAHD1 NME3 EME2 HN1L IGFALS SPSB3 MAPK8IP3 MIR3177 MRPS34
nsv457336 Chr.16:1752231 - 1791032 on Build GRCh38 Loss NME3 EME2 IGFALS SPSB3 MAPK8IP3 MRPS34 NUBP2
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion FAHD1 NME3 EME2 IGFALS SPSB3 MAPK8IP3 MIR3177 MRPS34 HAGH NUBP2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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