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See other ATP6V1G2-DDX39B CNV Assays ›
Gene Symbol
ATP6V1G2-DDX39B
Assay Reference Genome
Location

Chr.6:31532782 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02946055_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100532737

Gene Name:

 ATP6V1G2-DDX39B readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:31530219-31546848 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP6V1G2-DDX39B NR_037853.1

Target Gene Details

Entrez Gene ID:

 7919

Gene Name:

 DEAD-box helicase 39B

Gene Aliases:

 BAT1, D6S81E, UAP56

Location:

 Chr.6:31530219-31542475 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DDX39B NM_004640.6 NP_004631.1
NM_080598.5 NP_542165.1
NR_037852.1
AK127767.1 5 4791
AK222912.1 BAD96632.1
AK298194.1
BC000361.2 AAH00361.1
BC013006.2 AAH13006.1
BT009909.1 AAP88911.1
Z37166.1 CAA85523.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss LTA MICB HCG27 PSORS1C3 TCF19 HLA-C ATP6V1G2 POU5F1 HCP5 SNORD117 CCHCR1 DDX39B-AS1 MIR6891 DDX39B LOC100287329 HCG26 PSORS1C1 SNORD84 PSORS1C2 MICA HLA-B MCCD1 LOC102725068 CDSN ATP6V1G2-DDX39B NFKBIL1 C6orf15
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion STK19 HCG23 MICB MIR6721 C6orf10 PRRT1 CYP21A1P HLA-DRB6 LY6G6F LOC101929163 SNORD52 DDX39B-AS1 DDX39B HLA-DRA BTNL2 SNORA38 LOC100287329 HCG26 TNXA EHMT2 LOC100507547 LY6G6E SKIV2L HLA-DRB5 NEU1 BAG6 SNORD84 HSPA1A MIR4646 LY6G6C MCCD1 TNXB LY6G6D C6orf25 MSH5-SAPCD1 PPT2-EGFL8 C4B AIF1 CFB LTA MSH5 CYP21A2 C4A HLA-DRB1 SAPCD1-AS1 ATP6V1G2 NELFE CLIC1 RNF5 CSNK2B LTB HCP5 SNORD48 C6orf47 C6orf48 GPANK1 SNORD117 HSPA1L PRRC2A AGPAT1 GPSM3 LY6G5C MIR1236 VARS APOM LSM2 PBX2 DXO EGFL8 DDAH2 PPT2 TNF FKBPL C2-AS1 ABHD16A MIR6833 SLC44A4 LST1 NOTCH4 VWA7 LY6G5B AGER ATF6B HSPA1B NCR3 LOC102725068 ATP6V1G2-DDX39B MIR6832 NFKBIL1 ZBTB12 C2 SAPCD1
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss STK19 MICB CYP21A1P LY6G6F SNORD52 DDX39B-AS1 DDX39B SNORA38 LOC100287329 HCG26 TNXA EHMT2 LY6G6E SKIV2L NEU1 BAG6 SNORD84 HSPA1A MIR4646 MICA HLA-B LY6G6C MCCD1 TNXB LY6G6D C6orf25 MSH5-SAPCD1 C4B AIF1 CFB LTA MSH5 CYP21A2 C4A SAPCD1-AS1 ATP6V1G2 NELFE CLIC1 CSNK2B LTB HCP5 SNORD48 C6orf47 C6orf48 GPANK1 SNORD117 HSPA1L PRRC2A LY6G5C MIR1236 VARS APOM LSM2 MIR6891 DXO DDAH2 TNF C2-AS1 ABHD16A SLC44A4 LST1 VWA7 LY6G5B HSPA1B NCR3 LOC102725068 ATP6V1G2-DDX39B MIR6832 NFKBIL1 ZBTB12 C2 SAPCD1
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HCG23 MIR219A1 PFDN6 C6orf10 PRRT1 LOC101929163 TAP1 HLA-DOA TAP2 PSMB8 MIR5004 DDX39B HLA-DRA BTNL2 SNORA38 RXRB HCG26 EHMT2 LOC100507547 DAXX SKIV2L HLA-DRB5 BAG6 SNORD84 TAPBP MIR4646 KIFC1 MSH5-SAPCD1 C4B AIF1 LTA MSH5 C4A VPS52 SYNGAP1 SAPCD1-AS1 B3GALT4 CLIC1 CSNK2B LTB PSMB8-AS1 C6orf48 SNORD117 HSPA1L PSMB9 PRRC2A AGPAT1 LY6G5C MIR1236 PBX2 DXO EGFL8 HLA-DMB HLA-DMA ZBTB22 PHF1 TNF FKBPL MIR6833 RGL2 SLC44A4 LST1 NOTCH4 VWA7 LOC100294145 LY6G5B HSPA1B NCR3 HSD17B8 ZBTB12 HLA-DOB SAPCD1 STK19 HCG25 MICB RING1 MIR6721 HLA-DPB2 MIR6834 CYP21A1P HLA-DRB6 LY6G6F PPP1R2P1 SNORD52 DDX39B-AS1 WDR46 LOC100287329 TNXA LY6G6E NEU1 HCG24 HSPA1A HLA-DQA1 MIR3135B MIR6873 COL11A2 LY6G6C MCCD1 TNXB LY6G6D C6orf25 HLA-DPA1 RPS18 PPT2-EGFL8 CFB CYP21A2 HLA-DQA2 HLA-DRB1 ZBTB9 ATP6V1G2 NELFE RNF5 HCP5 SNORD48 C6orf47 GPANK1 GPSM3 CUTA VARS APOM LSM2 HLA-DQB1 DDAH2 BRD2 PPT2 C2-AS1 ABHD16A AGER ATF6B HLA-DQB2 HLA-DPB1 HLA-DQB1-AS1 LOC102725068 ATP6V1G2-DDX39B MIR6832 NFKBIL1 SLC39A7 C2
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HCG23 MIR219A1 PFDN6 C6orf10 PRRT1 LOC101929163 TAP1 HLA-DOA TAP2 PSMB8 MIR5004 DDX39B HLA-DRA BTNL2 SNORA38 RXRB HCG26 EHMT2 LOC100507547 DAXX SKIV2L HLA-DRB5 BAG6 SNORD84 TAPBP MIR4646 KIFC1 MSH5-SAPCD1 C4B AIF1 LTA MSH5 C4A VPS52 SYNGAP1 SAPCD1-AS1 B3GALT4 CLIC1 CSNK2B LTB PSMB8-AS1 C6orf48 SNORD117 HSPA1L PSMB9 PRRC2A AGPAT1 LY6G5C MIR1236 PBX2 DXO EGFL8 HLA-DMB HLA-DMA ZBTB22 PHF1 TNF FKBPL MIR6833 RGL2 SLC44A4 LST1 NOTCH4 VWA7 LOC100294145 LY6G5B HSPA1B NCR3 HSD17B8 ZBTB12 HLA-DOB SAPCD1 STK19 HCG25 MICB RING1 MIR6721 HLA-DPB2 MIR6834 CYP21A1P HLA-DRB6 LY6G6F PPP1R2P1 SNORD52 DDX39B-AS1 WDR46 LOC100287329 TNXA LY6G6E NEU1 HCG24 HSPA1A HLA-DQA1 MIR3135B MIR6873 COL11A2 LY6G6C MCCD1 TNXB LY6G6D C6orf25 HLA-DPA1 RPS18 PPT2-EGFL8 CFB CYP21A2 HLA-DQA2 HLA-DRB1 ZBTB9 ATP6V1G2 NELFE RNF5 HCP5 SNORD48 C6orf47 GPANK1 GPSM3 CUTA VARS APOM LSM2 HLA-DQB1 DDAH2 BRD2 PPT2 C2-AS1 ABHD16A AGER ATF6B HLA-DQB2 HLA-DPB1 HLA-DQB1-AS1 LOC102725068 ATP6V1G2-DDX39B MIR6832 NFKBIL1 SLC39A7 C2
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss STK19 HCG23 MICB MIR6721 C6orf10 PRRT1 CYP21A1P LY6G6F LOC101929163 SNORD52 DDX39B-AS1 DDX39B HLA-DRA BTNL2 SNORA38 LOC100287329 HCG26 TNXA EHMT2 LOC100507547 LY6G6E SKIV2L NEU1 BAG6 SNORD84 HSPA1A MIR4646 MICA HLA-B LY6G6C MCCD1 TNXB LY6G6D C6orf25 MSH5-SAPCD1 PPT2-EGFL8 C4B AIF1 CFB LTA MSH5 CYP21A2 C4A SAPCD1-AS1 ATP6V1G2 NELFE CLIC1 RNF5 CSNK2B LTB HCP5 SNORD48 C6orf47 C6orf48 GPANK1 SNORD117 HSPA1L PRRC2A AGPAT1 GPSM3 LY6G5C MIR1236 VARS APOM LSM2 PBX2 MIR6891 DXO EGFL8 DDAH2 PPT2 TNF FKBPL C2-AS1 ABHD16A MIR6833 SLC44A4 LST1 NOTCH4 VWA7 LY6G5B AGER ATF6B HSPA1B NCR3 LOC102725068 ATP6V1G2-DDX39B MIR6832 NFKBIL1 ZBTB12 C2 SAPCD1
nsv470809 Chr.6:31529138 - 31576412 on Build GRCh38 Loss SNORD117 MCCD1 LTA DDX39B-AS1 ATP6V1G2 SNORD84 ATP6V1G2-DDX39B NFKBIL1 DDX39B LOC100287329 TNF
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss LTA ATP6V1G2 CSNK2B LTB C6orf47 GPANK1 SNORD117 PRRC2A LY6G5C APOM DDX39B-AS1 DDX39B SNORA38 LOC100287329 TNF ABHD16A LST1 BAG6 SNORD84 LY6G5B MCCD1 NCR3 AIF1 ATP6V1G2-DDX39B MIR6832 NFKBIL1

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