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See other PLEKHN1 CNV Assays ›
Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:974410 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02952122_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 14 - Intron 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain RNF223 SAMD11 LOC100288175 AGRN KLHL17 LOC105378948 LOC100130417 HES4 LOC284600 PERM1 LOC107985728 ISG15 PLEKHN1 C1orf159 NOC2L
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss RNF223 LOC107985729 SSU72 LOC102724312 ATAD3C LOC101928626 OR4F5 MMP23B LOC105378592 SCNN1D LOC100130417 PERM1 B3GALT6 MIR1302-2 MIR200B LOC100132287 VWA1 FAM87B LOC102725121 CFAP74 UBE2J2 PRKCZ TMEM240 AURKAIP1 TAS1R3 MORN1 NOC2L PUSL1 LOC107984841 NADK AGRN LOC100506504 CDK11B DVL1 LOC284600 TTLL10-AS1 TNFRSF4 LOC100287934 MIR6727 MIR6808 CPSF3L MIR429 FAM132A KLHL17 LOC105378948 WASH7P SLC35E2B MIR6726 TNFRSF18 LOC100134822 LOC105378947 FAM41C SKI FAAP20 LOC105378591 SAMD11 LINC01342 LOC729737 CCNL2 MTND1P23 FNDC10 SDF4 HES4 ISG15 MIR6723 MTND2P28 CPTP LOC100288069 LOC100133331 LOC105378949 LOC100288175 ATAD3B FAM138A LINC00115 LOC105378589 ATAD3A LOC107985728 GNB1 TTLL10 MIR6859-2 MRPL20 TMEM88B CDK11A MIR6859-1 MIR200A LINC01128 OR4F16 MXRA8 MMP23A ANKRD65 LOC148413 SLC35E2 ACAP3 MIB2 PLEKHN1 CALML6 GABRD TMEM52 C1orf159 LOC100129534 OR4F29 DDX11L1
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion RNF223 SAMD11 LOC100288175 AGRN KLHL17 LOC105378948 LOC100130417 HES4 LOC284600 PERM1 LOC107985728 ISG15 PLEKHN1 C1orf159 NOC2L
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC100130417 LOC284600 PERM1 LOC107985728 PLEKHN1 SAMD11 NOC2L KLHL17
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain RNF223 SAMD11 LINC01342 AGRN LOC100130417 SDF4 HES4 LOC284600 PERM1 TTLL10-AS1 ISG15 MIR200A TNFRSF4 MIR200B MIR429 LOC100288175 KLHL17 LOC105378948 LOC107985728 TNFRSF18 PLEKHN1 C1orf159 TTLL10 NOC2L FAM41C
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain RNF223 LOC107984841 SAMD11 LOC101928626 MTND1P23 AGRN LOC100130417 HES4 LOC284600 PERM1 ISG15 MIR6723 MTND2P28 LINC01128 OR4F16 LOC100287934 LOC100288069 FAM87B LOC100133331 LOC100288175 LINC00115 KLHL17 LOC105378948 LOC107985728 PLEKHN1 C1orf159 LOC105378947 NOC2L FAM41C
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss RNF223 LOC107985729 SSU72 SAMD11 LINC01342 LOC102724312 ATAD3C CCNL2 MMP23B SCNN1D FNDC10 LOC100130417 SDF4 HES4 PERM1 ISG15 B3GALT6 CPTP MIR200B LOC100288069 VWA1 FAM87B LOC100288175 ATAD3B UBE2J2 LINC00115 TMEM240 AURKAIP1 ATAD3A LOC107985728 TAS1R3 TTLL10 NOC2L PUSL1 MRPL20 NADK AGRN TMEM88B CDK11A CDK11B DVL1 LOC284600 TTLL10-AS1 MIR200A LINC01128 TNFRSF4 LOC100287934 MXRA8 MMP23A MIR6727 MIR6808 ANKRD65 LOC148413 CPSF3L MIR429 FAM132A SLC35E2 ACAP3 MIB2 KLHL17 LOC105378948 SLC35E2B MIR6726 TNFRSF18 PLEKHN1 C1orf159 FAM41C
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss RNF223 SAMD11 LINC01342 AGRN LOC100130417 SDF4 HES4 LOC284600 PERM1 TTLL10-AS1 ISG15 MIR200A B3GALT6 LINC01128 TNFRSF4 MIR200B FAM87B MIR429 FAM132A LOC100288175 UBE2J2 LINC00115 KLHL17 LOC105378948 LOC107985728 TNFRSF18 PLEKHN1 C1orf159 TTLL10 NOC2L FAM41C
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain RNF223 SAMD11 LOC100288175 LINC01342 AGRN KLHL17 LOC105378948 HES4 PERM1 ISG15 PLEKHN1 C1orf159 NOC2L
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MRPL20 RNF223 SAMD11 LINC01342 CCNL2 AGRN TMEM88B SCNN1D LOC100130417 DVL1 SDF4 HES4 LOC284600 PERM1 TTLL10-AS1 ISG15 MIR200A B3GALT6 TNFRSF4 CPTP MXRA8 MIR200B MIR6727 MIR6808 ANKRD65 LOC148413 CPSF3L MIR429 FAM132A LOC100288175 UBE2J2 ACAP3 KLHL17 LOC105378948 AURKAIP1 MIR6726 LOC107985728 TAS1R3 TNFRSF18 PLEKHN1 C1orf159 TTLL10 NOC2L PUSL1
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss LOC100130417 HES4 LOC284600 PERM1 LOC107985728 ISG15 PLEKHN1 SAMD11 AGRN NOC2L KLHL17
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion RNF223 MIR429 SAMD11 LOC100288175 LINC01342 AGRN KLHL17 LOC105378948 SDF4 HES4 PERM1 TTLL10-AS1 ISG15 TNFRSF18 PLEKHN1 MIR200A C1orf159 TTLL10 TNFRSF4 NOC2L MIR200B
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LOC100130417 HES4 LOC284600 PERM1 LOC107985728 PLEKHN1 SAMD11 LINC01128 NOC2L FAM41C KLHL17

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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