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See other NALCN CNV Assays ›
Gene Symbol
NALCN
Assay Reference Genome
Location

Chr.13:101055190 on build GRCh38
Cytoband
13q32.3
Assay ID Hs02956382_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 259232

Gene Name:

 sodium leak channel, non-selective

Gene Aliases:

 CLIFAHDD, CanIon, IHPRF, IHPRF1, INNFD, VGCNL1, bA430M15.1

Location:

 Chr.13:101053774-101417206 on Build GRCh38

Assay Gene Location:

 Within Exon 47
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NALCN NM_052867.2 44 5511 NP_443099.1
XM_011521067.2 44 5451 XP_011519369.1
XM_011521068.2 44 5434 XP_011519370.1
XM_011521069.2 43 5364 XP_011519371.1
XM_017020534.1 43 5395 XP_016876023.1
XM_017020535.1 43 5337 XP_016876024.1
XM_017020536.1 39 5263 XP_016876025.1
XM_017020537.1 38 4652 XP_016876026.1
AK002089.1 3 578
AK055506.1 11 1568
AK126621.1 25 2975
AK126718.1 17 2112
AK172752.1 7 1042 BAD18738.1

Target Gene Details

Entrez Gene ID:

 100885778

Gene Name:

 NALCN antisense RNA 1

Gene Aliases:

 -

Location:

 Chr.13:100708325-101059286 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NALCN-AS1 NR_047687.1
AK025806.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv514687 Chr.13:101055199 - 101057295 on Build GRCh38 Gain NALCN NALCN-AS1
nsv1149 Chr.13:101042454 - 101087249 on Build GRCh38 Deletion NALCN NALCN-AS1
nsv832699 Chr.13:100951779 - 101142880 on Build GRCh38 Gain NALCN NALCN-AS1

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More Information


Additional Information:

For this assay, SNP(s) [rs553606039] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Function(s) Process(es)


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