Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 29072 |
Gene Name: | SET domain containing 2 |
Gene Aliases: |
HBP231, HIF-1, HIP-1, HSPC069, HYPB, KMT3A, LLS, SET2, p231HBP |
Location: |
Chr.3:47016408-47164109 on Build GRCh38 |
Assay Gene Location: | Within Exon 24 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SETD2 | NM_014159.6 | 21 | 7946 | NP_054878.5 |
| XM_011533631.2 | 22 | 9442 | XP_011531933.1 | |
| XM_011533632.2 | 21 | 8018 | XP_011531934.1 | |
| XM_011533633.2 | 21 | 9309 | XP_011531935.1 | |
| XM_011533634.1 | 21 | 7971 | XP_011531936.1 | |
| XM_017006270.1 | 19 | 9145 | XP_016861759.1 | |
| AB051519.2 | 19 | 5946 | BAB21823.2 | |
| AF049103.1 | 5 | 736 | AAC26194.1 | |
| AI671342.1 | ||||
| AJ238403.1 | 19 | 6793 | CAC28349.1 | |
| AK026837.1 | 7 | 1604 | ||
| AK095494.1 | 14 | 2402 | ||
| AL049470.1 | 1 | 1781 | ||
| AL713692.1 | 7 | 1212 | CAD28492.1 | |
| AL831959.1 | 19 | 7088 | CAD38601.2 | |
| AY576987.1 | 19 | 6455 | AAT77612.1 | |
| AY576988.1 | 21 | 6534 | AAT77613.1 | |
| BC090954.1 | 19 | 5736 | AAH90954.1 | |
| BC117162.1 | 19 | 6569 | ||
| BC117164.1 | 19 | 6569 | ||
| BX649110.1 | 19 | 7713 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv997261 | Chr.3:47013276 - 47092190 on Build GRCh38 | Gain |
 SETD2
NRADDP
|
| nsv428417 | Chr.3:46638962 - 47778557 on Build GRCh38 | Loss |
ALS2CL
PRSS50
SCAP
PRSS46
NRADDP
KIF9-AS1
MYL3
CSPG5
PTH1R
CCDC12
PTPN23
PRSS42
SNORD13P3
PRSS43
PRSS45
SETD2
TMIE
NBEAL2
KLHL18
ELP6
SMARCC1
KIF9
|
| esv3596073 | Chr.3:46936296 - 47131646 on Build GRCh38 | Loss |
SETD2
NRADDP
NBEAL2
CCDC12
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top