Hs02961877_cn

• Gene Symbol: PCDHB12
• Assay Reference Genome Location: Chr.5:141209380 on build GRCh38
• Cytoband: 5q31.3

Target Gene Details

• Entrez Gene ID: 56124
• Gene Name: protocadherin beta 12
• Gene Aliases: PCDH-BETA12
• Location: Chr.5:141208719-141212126 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHB12	NM_018932.3	1	662	NP_061755.1
	AF152491.1	1	473	AAD43752.1
	AF217746.1	1	473	AAK51614.1
	AK293336.1
	AK316160.1
	BC045637.1	1	662	AAH45637.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv599919	Chr.5:141182193 - 141212836 on Build GRCh38	Loss	PCDHB12 PCDHB11 PCDHB10 PCDHB16 PCDHB9
nsv823266	Chr.5:141156966 - 141222863 on Build GRCh38	Gain	PCDHB14 PCDHB12 PCDHB8 PCDHB11 PCDHB7 PCDHB13 PCDHB17P PCDHB10 PCDHB16 PCDHB9
nsv428127	Chr.5:141016768 - 141319173 on Build GRCh38	Loss	PCDHB6 PCDHB14 PCDHB12 PCDHB19P PCDHB11 LOC101926905 PCDHB17P PCDHB2 SLC25A2 PCDHB10 PCDHB3 PCDHB18P TAF7 PCDHB8 PCDHB1 PCDHB15 PCDHB7 PCDHB13 PCDHB5 PCDHB16 PCDHB9 PCDHB4
nsv471634	Chr.5:141106394 - 141258375 on Build GRCh38	Gain+Loss	PCDHB6 PCDHB14 PCDHB12 PCDHB19P PCDHB11 PCDHB17P PCDHB10 PCDHB18P PCDHB8 PCDHB15 PCDHB7 PCDHB13 PCDHB5 PCDHB16 PCDHB9 PCDHB4
nsv1024594	Chr.5:141167591 - 141243953 on Build GRCh38	Loss	PCDHB14 PCDHB12 PCDHB8 PCDHB19P PCDHB11 PCDHB7 PCDHB13 PCDHB10 PCDHB16 PCDHB9 PCDHB18P
dgv958e201	Chr.5:141174165 - 141215536 on Build GRCh38	Deletion	PCDHB12 PCDHB8 PCDHB11 PCDHB7 PCDHB13 PCDHB10 PCDHB16 PCDHB9
nsv599908	Chr.5:141139584 - 141250122 on Build GRCh38	Loss	PCDHB6 PCDHB14 PCDHB12 PCDHB19P PCDHB11 PCDHB17P PCDHB10 PCDHB18P PCDHB8 PCDHB15 PCDHB7 PCDHB13 PCDHB16 PCDHB9
esv2759382	Chr.5:140777355 - 141449115 on Build GRCh38	Gain	PCDHB12 PCDHGB3 PCDHB10 PCDHGA11 PCDHB3 PCDHA8 PCDHA5 PCDHB5 PCDHB9 PCDHA3 PCDHB14 PCDHA13 PCDHB17P SLC25A2 PCDHGA4 PCDHGA2 PCDHGA8 TAF7 PCDHB7 PCDHGB5 PCDHB13 PCDHGA1 PCDHGA5 PCDHB16 PCDHA1 PCDHB11 LOC101926905 PCDHGA3 PCDHGA9 PCDHGB6 PCDHB18P PCDHGB8P PCDHGB2 PCDHB8 PCDHGA10 PCDHGA7 PCDHGA6 PCDHA10 PCDHB1 PCDHB15 PCDHA6 PCDHA12 PCDHGB7 PCDHA2 PCDHB6 PCDHB19P PCDHA9 PCDHAC1 PCDHB2 PCDHA7 PCDHGB4 PCDHGA12 PCDHA4 PCDHGB1 PCDHAC2 PCDHA11 PCDHB4
esv3606973	Chr.5:141203379 - 141210938 on Build GRCh38	Loss	PCDHB12
nsv969261	Chr.5:141199392 - 141210803 on Build GRCh38	Duplication	PCDHB12 PCDHB11
esv2730846	Chr.5:141193679 - 141210136 on Build GRCh38	Deletion	PCDHB12 PCDHB11 PCDHB10
nsv980737	Chr.5:141209299 - 141211497 on Build GRCh38	Duplication	PCDHB12
esv2664767	Chr.5:141177668 - 141213756 on Build GRCh38	Deletion	PCDHB12 PCDHB8 PCDHB11 PCDHB10 PCDHB16 PCDHB9

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

cell adhesion
homophilic cell adhesion via plasma membrane adhesion molecules
nervous system development

Function(s)

calcium ion binding