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See other TNFRSF18 CNV Assays ›
Gene Symbol
TNFRSF18
Assay Reference Genome
Location

Chr.1:1203641 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02978822_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8784

Gene Name:

 TNF receptor superfamily member 18

Gene Aliases:

 AITR, CD357, GITR, GITR-D

Location:

 Chr.1:1203508-1207900 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFRSF18 NM_004195.2 5 1067 NP_004186.1
NM_148901.1 4 856 NP_683699.1
NM_148902.1 5 1046 NP_683700.1
XM_017002722.1 4 2323 XP_016858211.1
AF241229.1 4 718 AAF63506.1
AY358877.1 AAQ89236.1
KP067911.1 4 1132

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC105378948 C1orf159 LINC01342 TNFRSF4 SDF4 ISG15 MIR200A MIR429 TTLL10 PLEKHN1 LOC284600 SAMD11 AGRN TNFRSF18 MIR200B KLHL17 PERM1 LOC107985728 RNF223 HES4 TTLL10-AS1 LOC100288175 FAM41C LOC100130417 NOC2L
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication CPSF3L LOC105378948 C1orf159 LINC01342 TNFRSF4 SDF4 FAM132A MIR200A PUSL1 MIR429 TTLL10 MIR6727 UBE2J2 MIR6726 AGRN TNFRSF18 MIR200B TAS1R3 SCNN1D RNF223 B3GALT6 TTLL10-AS1 LOC100288175 CPTP ACAP3
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss CPSF3L CCNL2 FAM132A MRPL20 FNDC10 VWA1 LOC100288069 MIR429 TMEM88B TTLL10 MIR6808 LOC100287934 SAMD11 SSU72 AGRN LOC107985729 LOC148413 SLC35E2B MIR200B KLHL17 MIB2 SLC35E2 LOC107985728 RNF223 HES4 MMP23B TTLL10-AS1 LOC100288175 FAM41C MXRA8 NOC2L CPTP ANKRD65 LOC105378948 C1orf159 LINC01342 TNFRSF4 SDF4 ISG15 TMEM240 MIR200A PUSL1 LINC01128 MIR6727 PLEKHN1 UBE2J2 ATAD3C MIR6726 DVL1 LOC284600 LOC102724312 CDK11A FAM87B AURKAIP1 TNFRSF18 NADK MMP23A TAS1R3 PERM1 SCNN1D ATAD3A B3GALT6 LINC00115 LOC100130417 ATAD3B CDK11B ACAP3
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss OR4F16 MIR1302-2 FAM132A TMEM52 MIR6723 FAAP20 LOC105378591 SAMD11 GNB1 AGRN PRKCZ LOC100133331 LOC107984841 LOC107985729 LOC148413 LOC105378589 MIR200B KLHL17 SKI RNF223 MTND1P23 HES4 FAM41C MXRA8 LOC105378592 LOC105378948 OR4F29 LINC01342 CFAP74 TNFRSF4 ISG15 TMEM240 MIR200A LINC01128 MIR6727 OR4F5 ATAD3C MIR6726 LOC102724312 FAM87B ATAD3A B3GALT6 LOC100129534 LOC100134822 LOC100130417 LOC729737 CPSF3L CCNL2 MRPL20 FNDC10 GABRD VWA1 DDX11L1 LOC100288069 MIR429 TMEM88B WASH7P TTLL10 MIR6808 LOC101928626 LOC100287934 SSU72 LOC100132287 FAM138A CALML6 SLC35E2B MIB2 SLC35E2 LOC107985728 LOC102725121 MMP23B TTLL10-AS1 LOC100288175 NOC2L CPTP ANKRD65 LOC105378949 C1orf159 SDF4 PUSL1 LOC105378947 MORN1 LOC100506504 PLEKHN1 UBE2J2 DVL1 LOC284600 CDK11A MIR6859-1 AURKAIP1 TNFRSF18 NADK MTND2P28 MMP23A TAS1R3 PERM1 SCNN1D LINC00115 MIR6859-2 ATAD3B CDK11B ACAP3
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LOC105378948 C1orf159 LINC01342 TNFRSF4 SDF4 FAM132A ISG15 MIR200A MIR429 LINC01128 TTLL10 PLEKHN1 UBE2J2 LOC284600 SAMD11 AGRN FAM87B TNFRSF18 MIR200B KLHL17 PERM1 LOC107985728 RNF223 B3GALT6 LINC00115 HES4 TTLL10-AS1 LOC100288175 FAM41C LOC100130417 NOC2L
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ANKRD65 CPSF3L CCNL2 C1orf159 LINC01342 TNFRSF4 SDF4 FAM132A MRPL20 TMEM240 FNDC10 VWA1 MIR200A PUSL1 MIR429 TMEM88B TTLL10 MIR6808 MIR6727 UBE2J2 ATAD3C MIR6726 DVL1 SSU72 LOC102724312 AURKAIP1 TNFRSF18 LOC107985729 LOC148413 MIR200B TAS1R3 MIB2 SCNN1D ATAD3A B3GALT6 MMP23B TTLL10-AS1 MXRA8 CPTP ATAD3B CDK11B ACAP3
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain ANKRD65 CPSF3L CCNL2 LOC105378948 C1orf159 LINC01342 TNFRSF4 SDF4 FAM132A ISG15 MRPL20 MIR200A PUSL1 MIR429 TMEM88B TTLL10 MIR6808 MIR6727 PLEKHN1 UBE2J2 MIR6726 DVL1 LOC284600 SAMD11 AGRN AURKAIP1 TNFRSF18 LOC148413 MIR200B KLHL17 TAS1R3 PERM1 SCNN1D LOC107985728 RNF223 B3GALT6 HES4 TTLL10-AS1 LOC100288175 MXRA8 LOC100130417 NOC2L CPTP ACAP3
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion LOC105378948 TNFRSF18 C1orf159 LINC01342 TNFRSF4 SDF4 ISG15 MIR200B KLHL17 PERM1 RNF223 MIR200A MIR429 TTLL10 HES4 TTLL10-AS1 LOC100288175 PLEKHN1 NOC2L SAMD11 AGRN
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain LOC105378948 TNFRSF18 C1orf159 LINC01342 TNFRSF4 SDF4 FAM132A MIR200B SCNN1D RNF223 MIR200A B3GALT6 MIR429 TTLL10 TTLL10-AS1 UBE2J2
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TNFRSF18 C1orf159 LINC01342 TNFRSF4 SDF4 FAM132A MIR200B SCNN1D RNF223 MIR200A B3GALT6 MIR429 TTLL10 TTLL10-AS1 UBE2J2 MIR6726 ACAP3
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain CPSF3L TNFRSF18 TNFRSF4 SDF4 FAM132A MIR200B SCNN1D MIR200A PUSL1 B3GALT6 MIR429 TTLL10 TTLL10-AS1 MIR6727 UBE2J2 MIR6726 ACAP3
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss TNFRSF18 TTLL10 TTLL10-AS1 TNFRSF4 SDF4 B3GALT6

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