Hs03000837_cn

• Gene Symbol: USP42
• Assay Reference Genome Location: Chr.7:6111202 on build GRCh38
• Cytoband: 7p22.1

Target Gene Details

• Entrez Gene ID: 84132
• Gene Name: ubiquitin specific peptidase 42
• Gene Aliases: -
• Location: Chr.7:6078743-6161564 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
USP42	NM_032172.2	2	192	NP_115548.1
	XM_005249883.4	2	139	XP_005249940.1
	XM_006715790.1	2	139	XP_006715853.1
	XM_006715791.2	5	645	XP_006715854.1
	XM_011515573.1	6	704	XP_011513875.1
	XM_011515574.1	2	137	XP_011513876.1
	XM_011515578.1	2	134	XP_011513880.1
	AJ601395.1	1	69	CAE53097.1
	AK022759.1	2	136	BAB14232.1
	AK298164.1	2	163
	AK309375.1	2	134
	AY618868.1	2	136
	BC060846.1	2	131	AAH60846.2
	BC132862.1	1	89
	DB457216.2	2	219
	DR001777.1	2	196

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1034916	Chr.7:5895149 - 6119339 on Build GRCh38	Gain	PMS2 RSPH10B USP42 ANKRD61 CCZ1 EIF2AK1 AIMP2
nsv436904	Chr.7:5035574 - 6713282 on Build GRCh38	Insertion	CYTH3 RSPH10B C7orf26 DAGLB ZNF316 ZNF815P PMS2 MIR6874 MIR589 ACTB RNF216-IT1 RNF216 ANKRD61 ZNF853 TNRC18 FSCN1 CCZ1 KDELR2 RAC1 OCM SLC29A4 LOC100129484 ZNF890P WIPI2 FBXL18 USP42 ZDHHC4 LOC221946 AIMP2 GRID2IP FAM220A RBAK-RBAKDN RBAKDN LOC107986762 RBAK ZNF12 LOC100419773 EIF2AK1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
spermatogenesis
protein deubiquitination
cell differentiation

Function(s)

thiol-dependent ubiquitin-specific protease activity
protein binding