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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147186888 on build GRCh38
Cytoband
1q21.1
Assay ID Hs03018247_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 7 1870 NP_001138302.1
NM_001461.3 9 2003 NP_001452.2
XM_005272946.4 9 1977 XP_005273003.1
XM_005272947.4 9 1721 XP_005273004.1
XM_005272948.4 9 1704 XP_005273005.1
XM_006711245.3 8 1640 XP_006711308.1
XM_011509350.2 9 2008 XP_011507652.1
XM_011509351.2 8 1740 XP_011507653.1
XM_017000801.1 8 1752 XP_016856290.1
XM_017000802.1 8 1522 XP_016856291.1
AK222728.1 9 1718 BAD96448.1
AK225739.1
AK314647.1
BC035687.1 7 1543 AAH35687.1
L37080.1 9 1689 AAA67849.1
Z47553.1 9 1695 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss MIR6736 LOC100996517 NOTCH2NL RBM8A RNVU1-6 GJA5 LINC00624 GNRHR2 LOC100505824 NUDT4P2 RNVU1-3 POLR3C LIX1L GJA8 NBPF11 NUDT17 MIR6077 FMO5 RNU1-13P LOC284561 NBPF10 TXNIP RNVU1-7 PDIA3P1 NBPF12 HYDIN2 GPR89A PDE4DIP LOC101927468 ANKRD35 LOC105371226 GPR89B POLR3GL ANKRD34A NBPF13P CHD1L PPIAL4G LOC100132057 HFE2 PDZK1 PDZK1P1 LOC105371242 RNVU1-1 RNF115 RNVU1-8 LOC728989 CD160 NBPF14 CH17-408M7.1 LINC01138 NUDT4P1 PRKAB2 ACP6 BCL9 LOC100996763 LOC101928979 ITGA10 PIAS3 MIR5087 PEX11B
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain CHD1L LOC100996517 NOTCH2NL PPIAL4G LOC100132057 RNVU1-6 PDZK1P1 LOC105371242 GJA5 LINC00624 RNVU1-1 RNVU1-8 LOC100505824 NUDT4P2 LOC728989 RNVU1-3 NBPF14 GJA8 NBPF11 MIR6077 CH17-408M7.1 FMO5 LINC01138 RNU1-13P NUDT4P1 PRKAB2 LOC284561 ACP6 NBPF10 RNVU1-7 PDIA3P1 BCL9 NBPF12 LOC100996763 LOC101928979 HYDIN2 PDE4DIP LOC101927468 MIR5087 LOC105371226 GPR89B NBPF13P
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss CHD1L LOC100996517 NOTCH2NL PPIAL4G LOC100132057 PDZK1P1 LOC105371242 GJA5 LINC00624 RNVU1-1 RNVU1-8 LOC100505824 NUDT4P2 LOC728989 RNVU1-3 NBPF14 GJA8 NBPF11 MIR6077 CH17-408M7.1 FMO5 LINC01138 RNU1-13P NUDT4P1 PRKAB2 LOC284561 ACP6 NBPF10 RNVU1-7 PDIA3P1 BCL9 NBPF12 LOC100996763 HYDIN2 PDE4DIP LOC101927468 MIR5087 LOC105371226 GPR89B NBPF13P
nsv1077657 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion CHD1L FMO5 RNVU1-8 PRKAB2 LOC728989 PDIA3P1 NBPF13P
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion CHD1L LOC100996517 NOTCH2NL PPIAL4G LOC100132057 HFE2 RNVU1-6 PDZK1P1 LOC105371242 GJA5 LINC00624 RNVU1-1 RNVU1-8 LOC100505824 NUDT4P2 LOC728989 RNVU1-3 LIX1L NBPF14 GJA8 NBPF11 MIR6077 CH17-408M7.1 FMO5 LINC01138 RNU1-13P NUDT4P1 PRKAB2 LOC284561 ACP6 NBPF10 TXNIP RNVU1-7 PDIA3P1 BCL9 NBPF12 LOC100996763 LOC101928979 HYDIN2 PDE4DIP LOC101927468 MIR5087 LOC105371226 GPR89B POLR3GL ANKRD34A NBPF13P
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication CHD1L LOC100996517 NOTCH2NL PPIAL4G LOC100132057 PDZK1P1 LOC105371242 GJA5 LINC00624 RNVU1-1 RNVU1-8 LOC100505824 NUDT4P2 LOC728989 RNVU1-3 NBPF14 GJA8 NBPF11 MIR6077 CH17-408M7.1 FMO5 LINC01138 RNU1-13P NUDT4P1 PRKAB2 LOC284561 ACP6 RNVU1-7 PDIA3P1 BCL9 NBPF12 LOC100996763 HYDIN2 PDE4DIP LOC101927468 MIR5087 LOC105371226 GPR89B NBPF13P
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain CHD1L LOC100996517 NOTCH2NL PPIAL4G LOC100132057 RNVU1-6 PDZK1P1 LOC105371242 GJA5 LINC00624 RNVU1-1 RNVU1-8 LOC100505824 NUDT4P2 LOC728989 RNVU1-3 NBPF14 GJA8 NBPF11 MIR6077 CH17-408M7.1 FMO5 LINC01138 RNU1-13P NUDT4P1 PRKAB2 LOC284561 ACP6 NBPF10 RNVU1-7 PDIA3P1 BCL9 NBPF12 LOC100996763 LOC101928979 HYDIN2 PDE4DIP LOC101927468 MIR5087 LOC105371226 GPR89B NBPF13P
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion CHD1L LOC100996517 NOTCH2NL PPIAL4G LOC100132057 NBPF9 PDZK1P1 LOC105371242 GJA5 LINC00624 RNVU1-1 RNVU1-8 LOC100505824 NUDT4P2 LOC728989 RNVU1-3 NBPF14 GJA8 NBPF11 MIR6077 CH17-408M7.1 FMO5 LINC01138 RNU1-13P NUDT4P1 PRKAB2 LOC284561 ACP6 NBPF10 RNVU1-7 PDIA3P1 BCL9 NBPF12 LOC100996763 LOC101928979 HYDIN2 PDE4DIP LOC101927468 MIR5087 LOC105371226 GPR89B NBPF13P
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss CHD1L FMO5 PRKAB2 PDIA3P1

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