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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147208886 on build GRCh38
Cytoband
1q21.1
Assay ID Hs03023708_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 6 1195 NP_001138301.1
NM_001144830.2 5 1405 NP_001138302.1
NM_001461.3 6 1185 NP_001452.2
XM_005272946.4 6 1159 XP_005273003.1
XM_005272947.4 6 903 XP_005273004.1
XM_005272948.4 6 886 XP_005273005.1
XM_006711244.3 6 1175 XP_006711307.1
XM_006711245.3 6 1175 XP_006711308.1
XM_011509350.2 6 1190 XP_011507652.1
XM_011509351.2 5 922 XP_011507653.1
XM_017000801.1 5 934 XP_016856290.1
XM_017000802.1 5 704 XP_016856291.1
AK022172.1 5 1395 BAB13975.1
AK222728.1 6 900 BAD96448.1
AK225739.1 6 910
AK314647.1 6 1113
BC035687.1 5 1078 AAH35687.1
L37080.1 6 871 AAA67849.1
Z47553.1 6 877 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss GJA5 CHD1L LINC01138 MIR6736 PIAS3 GJA8 MIR6077 NBPF14 RNU1-13P LOC100996763 LOC101928979 PDIA3P1 GPR89A NUDT4P1 LOC105371226 HFE2 HYDIN2 RNVU1-1 NUDT17 ACP6 PDZK1P1 RBM8A ITGA10 RNVU1-8 ANKRD35 MIR5087 LOC100505824 LOC284561 CH17-408M7.1 TXNIP NBPF13P RNVU1-7 NOTCH2NL LOC728989 PEX11B NBPF11 FMO5 POLR3C NUDT4P2 CD160 LOC100132057 LINC00624 BCL9 ANKRD34A RNF115 RNVU1-3 NBPF10 RNVU1-6 GPR89B LOC101927468 PRKAB2 NBPF12 PDZK1 PDE4DIP GNRHR2 LOC105371242 LIX1L PPIAL4G LOC100996517 POLR3GL
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain GJA5 CHD1L RNVU1-7 NOTCH2NL LOC728989 LINC01138 GJA8 MIR6077 NBPF11 NBPF14 RNU1-13P FMO5 LOC100996763 LOC101928979 NUDT4P2 PDIA3P1 LOC100132057 LINC00624 BCL9 NUDT4P1 LOC105371226 HYDIN2 RNVU1-3 NBPF10 RNVU1-1 ACP6 RNVU1-6 PDZK1P1 GPR89B LOC101927468 PRKAB2 RNVU1-8 NBPF12 PDE4DIP LOC105371242 MIR5087 LOC100505824 LOC284561 PPIAL4G LOC100996517 CH17-408M7.1 NBPF13P
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss GJA5 CHD1L RNVU1-7 NOTCH2NL LOC728989 LINC01138 GJA8 MIR6077 NBPF11 NBPF14 RNU1-13P FMO5 LOC100996763 NUDT4P2 PDIA3P1 LOC100132057 LINC00624 BCL9 NUDT4P1 LOC105371226 HYDIN2 RNVU1-3 NBPF10 RNVU1-1 ACP6 PDZK1P1 GPR89B LOC101927468 PRKAB2 RNVU1-8 NBPF12 PDE4DIP LOC105371242 MIR5087 LOC100505824 LOC284561 PPIAL4G LOC100996517 CH17-408M7.1 NBPF13P
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion GJA5 CHD1L RNVU1-7 NOTCH2NL LOC728989 LINC01138 GJA8 MIR6077 NBPF11 NBPF14 RNU1-13P FMO5 LOC100996763 LOC101928979 NUDT4P2 PDIA3P1 LOC100132057 LINC00624 BCL9 ANKRD34A NUDT4P1 LOC105371226 HFE2 HYDIN2 RNVU1-3 NBPF10 RNVU1-1 ACP6 RNVU1-6 PDZK1P1 GPR89B LOC101927468 PRKAB2 RNVU1-8 NBPF12 PDE4DIP LOC105371242 LIX1L MIR5087 LOC100505824 LOC284561 PPIAL4G LOC100996517 CH17-408M7.1 TXNIP POLR3GL NBPF13P
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication GJA5 CHD1L RNVU1-7 NOTCH2NL LOC728989 LINC01138 GJA8 MIR6077 NBPF11 NBPF14 RNU1-13P FMO5 LOC100996763 NUDT4P2 PDIA3P1 LOC100132057 LINC00624 BCL9 NUDT4P1 LOC105371226 HYDIN2 RNVU1-3 RNVU1-1 ACP6 PDZK1P1 GPR89B LOC101927468 PRKAB2 RNVU1-8 NBPF12 PDE4DIP LOC105371242 MIR5087 LOC100505824 LOC284561 PPIAL4G LOC100996517 CH17-408M7.1 NBPF13P
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain GJA5 CHD1L RNVU1-7 NOTCH2NL LOC728989 LINC01138 GJA8 MIR6077 NBPF11 NBPF14 RNU1-13P FMO5 LOC100996763 LOC101928979 NUDT4P2 PDIA3P1 LOC100132057 LINC00624 BCL9 NUDT4P1 LOC105371226 HYDIN2 RNVU1-3 NBPF10 RNVU1-1 ACP6 RNVU1-6 PDZK1P1 GPR89B LOC101927468 PRKAB2 RNVU1-8 NBPF12 PDE4DIP LOC105371242 MIR5087 LOC100505824 LOC284561 PPIAL4G LOC100996517 CH17-408M7.1 NBPF13P
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion GJA5 CHD1L RNVU1-7 NOTCH2NL LOC728989 LINC01138 NBPF9 GJA8 MIR6077 NBPF11 NBPF14 RNU1-13P FMO5 LOC100996763 LOC101928979 NUDT4P2 PDIA3P1 LOC100132057 LINC00624 BCL9 NUDT4P1 LOC105371226 HYDIN2 RNVU1-3 NBPF10 RNVU1-1 ACP6 PDZK1P1 GPR89B LOC101927468 PRKAB2 RNVU1-8 NBPF12 PDE4DIP LOC105371242 MIR5087 LOC100505824 LOC284561 PPIAL4G LOC100996517 CH17-408M7.1 NBPF13P
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss FMO5 CHD1L PDIA3P1 PRKAB2

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