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System Message

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Gene Symbol: ILK
Assay Reference Genome Location: Chr.11:6610845 on build GRCh38
Cytoband: 11p15.4

Assay ID

Hs03026282_cn

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Availability	Made To Order
Catalog #	4400291
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Genomic Map
Assay Details
More Information

Assay Details

Target Gene Details

Entrez Gene ID:	3611
Gene Name:	integrin linked kinase
Gene Aliases:	HEL-S-28, ILK-1, ILK-2, P59, p59ILK
Location:	Chr.11:6603708-6610874 on Build GRCh38
Assay Gene Location:	Overlaps - Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ILK	NM_001014794.2			NP_001014794.1
	NM_001014795.2			NP_001014795.1
	NM_001278441.1			NP_001265370.1
	NM_001278442.1			NP_001265371.1
	NM_004517.3			NP_004508.1
	XM_005252904.4			XP_005252961.1
	XM_005252905.2			XP_005252962.1
	XM_011520065.1			XP_011518367.1
	XM_017017672.1			XP_016873161.1
	AB209416.1			BAD92653.1
	AK293474.1
	AK296628.1
	BC001554.1			AAH01554.1
	CR749220.1			CAH18077.1
	EU794625.1
	HY257434.1
	U40282.1			AAC16892.1

Target Gene Details

Entrez Gene ID:	6881
Gene Name:	TATA-box binding protein associated factor 10
Gene Aliases:	TAF2A, TAF2H, TAFII30
Location:	Chr.11:6610817-6612244 on Build GRCh38
Assay Gene Location:	Overlaps - Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TAF10	NM_006284.3			NP_006275.1
	AL833496.1	3	844
	BC012088.1			AAH12088.1
	BM990572.1
	U13991.1			AAA62230.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv553373	Chr.11:6601484 - 6647097 on Build GRCh38	Loss	TPP1 DCHS1 RRP8 ILK TAF10
nsv1035138	Chr.11:6607812 - 6980555 on Build GRCh38	Gain	OR2AG2 OR10A5 OR2D2 OR10A2 OR6A2 TAF10 OR2AG1 GVINP1 OR2D3 TPP1 DCHS1 MRPL17 OR10A4 ILK ZNF215
esv996362	Chr.11:6597567 - 6612421 on Build GRCh38	Deletion	RRP8 ILK TAF10
nsv825755	Chr.11:6591998 - 6656613 on Build GRCh38	Gain	TPP1 DCHS1 RRP8 ILK TAF10

More Information

Set Membership:

Intragenic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

general transcription factor

Gene Ontology Categories:

Function(s) Process(es)

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