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See other PUSL1 CNV Assays ›
Gene Symbol
PUSL1
Assay Reference Genome
Location

Chr.1:1308713 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03041224_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126789

Gene Name:

 pseudouridylate synthase-like 1

Gene Aliases:

 -

Location:

 Chr.1:1308562-1311677 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 1 - Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PUSL1 NM_153339.1 NP_699170.1
XM_005244720.3 XP_005244777.1
AK075292.1 BAC11527.1
AK298218.1
BC034304.1 AAH34304.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss TTLL10-AS1 MMP23B TNFRSF18 ATAD3A CPSF3L LOC101928626 MIR200A MTND1P23 TAS1R3 SKI CDK11A TMEM88B FAM41C SLC35E2 TTLL10 TMEM52 LOC105378592 FAAP20 LOC100130417 LOC100288069 LOC105378591 MTND2P28 PUSL1 LOC100132287 LOC100287934 DDX11L1 LOC102724312 LOC105378949 GNB1 LOC100134822 HES4 LOC148413 LOC729737 MIB2 MMP23A MIR6808 B3GALT6 VWA1 DVL1 SDF4 KLHL17 MIR6859-2 LINC00115 CALML6 PLEKHN1 ANKRD65 CPTP LOC100506504 MIR429 FAM132A LOC107985728 NADK SLC35E2B MIR6727 LOC105378948 WASH7P LOC100288175 MRPL20 ATAD3C LOC100133331 CFAP74 LOC100129534 FAM138A CDK11B MORN1 TNFRSF4 C1orf159 LOC107985729 MIR200B UBE2J2 GABRD AGRN AURKAIP1 OR4F16 LINC01128 ACAP3 SAMD11 ISG15 OR4F5 FNDC10 MXRA8 RNF223 PERM1 TMEM240 OR4F29 SCNN1D SSU72 MIR6859-1 LOC105378589 PRKCZ CCNL2 MIR6726 LOC284600 MIR1302-2 NOC2L LOC105378947 LINC01342 LOC102725121 ATAD3B LOC107984841 MIR6723 FAM87B
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss MIR6726 TAS1R3 MIR6808 ACAP3 PUSL1 MIR6727 DVL1 CPSF3L CPTP
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss MIR6726 MXRA8 AURKAIP1 TAS1R3 MIR6808 ACAP3 PUSL1 MIR6727 DVL1 CPSF3L CPTP SCNN1D
dgv7n100 Chr.1:1306835 - 1379057 on Build GRCh38 Loss MXRA8 AURKAIP1 TAS1R3 MIR6808 ACAP3 PUSL1 MIR6727 DVL1 CPSF3L CPTP
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss TTLL10-AS1 MXRA8 RNF223 TNFRSF18 CPSF3L SCNN1D MIR200A TNFRSF4 TAS1R3 MIR6808 B3GALT6 DVL1 SDF4 C1orf159 MIR6726 MIR200B UBE2J2 LINC01342 CPTP TTLL10 MIR429 AURKAIP1 FAM132A ACAP3 PUSL1 MIR6727
dgv6n100 Chr.1:1301750 - 1362354 on Build GRCh38 Gain+Loss MXRA8 TAS1R3 MIR6808 ACAP3 PUSL1 MIR6727 DVL1 CPSF3L CPTP
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication LOC100288175 TTLL10-AS1 RNF223 TNFRSF18 CPSF3L SCNN1D MIR200A TNFRSF4 TAS1R3 B3GALT6 SDF4 C1orf159 MIR6726 MIR200B UBE2J2 LINC01342 AGRN CPTP TTLL10 MIR429 FAM132A ACAP3 PUSL1 MIR6727 LOC105378948
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MIR6726 MXRA8 AURKAIP1 TAS1R3 MIR6808 ACAP3 PUSL1 MIR6727 DVL1 CPSF3L CPTP SCNN1D
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC100288175 TTLL10-AS1 MMP23B TNFRSF18 MRPL20 ATAD3C ATAD3A CPSF3L CDK11B MIR200A TNFRSF4 TAS1R3 CDK11A C1orf159 LOC107985729 MIR200B TMEM88B FAM41C UBE2J2 AGRN SLC35E2 TTLL10 AURKAIP1 LOC100130417 LOC100288069 LINC01128 ACAP3 PUSL1 LOC100287934 LOC102724312 SAMD11 ISG15 FNDC10 MXRA8 RNF223 PERM1 TMEM240 HES4 SCNN1D SSU72 LOC148413 MIB2 MMP23A MIR6808 B3GALT6 VWA1 DVL1 SDF4 KLHL17 CCNL2 MIR6726 LOC284600 LINC00115 PLEKHN1 NOC2L ANKRD65 LINC01342 CPTP MIR429 FAM132A ATAD3B LOC107985728 NADK SLC35E2B MIR6727 LOC105378948 FAM87B
esv3890636 Chr.1:1304555 - 1353203 on Build GRCh38 Loss MXRA8 TAS1R3 MIR6808 ACAP3 PUSL1 MIR6727 DVL1 CPSF3L CPTP
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion FNDC10 TTLL10-AS1 MXRA8 MMP23B TNFRSF18 MRPL20 ATAD3C TMEM240 ATAD3A CPSF3L SCNN1D CDK11B SSU72 LOC148413 MIB2 MIR200A TNFRSF4 TAS1R3 MIR6808 B3GALT6 VWA1 DVL1 SDF4 C1orf159 CCNL2 MIR6726 LOC107985729 MIR200B TMEM88B UBE2J2 ANKRD65 LINC01342 CPTP TTLL10 MIR429 AURKAIP1 FAM132A ATAD3B ACAP3 PUSL1 MIR6727 LOC102724312
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MIR6726 MXRA8 TAS1R3 MIR6808 ACAP3 PUSL1 MIR6727 DVL1 CPSF3L CPTP SCNN1D
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6726 MXRA8 UBE2J2 CPSF3L CPTP SCNN1D AURKAIP1 TAS1R3 MIR6808 ACAP3 PUSL1 MIR6727 DVL1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain SAMD11 ISG15 LOC100288175 TTLL10-AS1 MXRA8 RNF223 TNFRSF18 PERM1 MRPL20 HES4 CPSF3L SCNN1D LOC148413 MIR200A TNFRSF4 TAS1R3 MIR6808 B3GALT6 DVL1 SDF4 C1orf159 KLHL17 CCNL2 MIR6726 LOC284600 MIR200B PLEKHN1 NOC2L TMEM88B UBE2J2 ANKRD65 LINC01342 AGRN CPTP TTLL10 MIR429 AURKAIP1 LOC100130417 FAM132A LOC107985728 ACAP3 PUSL1 MIR6727 LOC105378948
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain TTLL10-AS1 MIR6726 TNFRSF18 MIR200B UBE2J2 CPSF3L SCNN1D TTLL10 MIR429 MIR200A TNFRSF4 FAM132A B3GALT6 ACAP3 PUSL1 MIR6727 SDF4

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

lyase

Gene Ontology Categories:

Function(s) Process(es)


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