Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 79058 |
Gene Name: | ASPSCR1, UBX domain containing tether for SLC2A4 |
Gene Aliases: |
ASPCR1, ASPL, ASPS, RCC17, TUG, UBXD9, UBXN9 |
Location: |
Chr.17:81977550-82018929 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 19 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ASPSCR1 | XM_011523601.2 | XP_011521903.1 | ||
| XM_011523602.2 | XP_011521904.1 | |||
| XM_017025036.1 | XP_016880525.1 | |||
| XM_017025037.1 | XP_016880526.1 | |||
| XM_017025038.1 | XP_016880527.1 | |||
| XM_017025039.1 | XP_016880528.1 | |||
| XM_017025040.1 | XP_016880529.1 | |||
| XM_017025041.1 | XP_016880530.1 |
Target Gene Details
Entrez Gene ID: | 201254 |
Gene Name: | stimulated by retinoic acid 13 |
Gene Aliases: |
CENP-X, CENPX, D9, FAAP10, MHF2 |
Location: |
Chr.17:82018703-82022930 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| STRA13 | NM_001271006.1 | 5 | 598 | NP_001257935.1 |
| NM_001271007.1 | 4 | 529 | NP_001257936.1 | |
| NM_144998.3 | 4 | 544 | NP_659435.2 | |
| XM_005256339.2 | 5 | 750 | XP_005256396.1 | |
| XM_017024326.1 | 3 | 951 | XP_016879815.1 | |
| XM_017024327.1 | 4 | 823 | XP_016879816.1 | |
| XM_017024328.1 | 4 | 692 | XP_016879817.1 | |
| XM_017024329.1 | 3 | 638 | XP_016879818.1 | |
| BC009571.1 | 4 | 513 | AAH09571.1 | |
| BC011610.1 | 4 | 480 | AAH11610.1 | |
| BI837753.1 | 4 | 512 | ||
| BQ648002.1 | 1 | 233 | ||
| U95006.1 | 4 | 499 | AAB53638.1 | |
| U95007.1 | 4 | 484 | AAB53639.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv952392 | Chr.17:81885825 - 82065724 on Build GRCh38 | Deletion |
 MAFG-AS1
PCYT2
ASPSCR1
DCXR
STRA13
NPB
PYCR1
RAC3
GPS1
MAFG
RFNG
ALYREF
NOTUM
ANAPC11
MYADML2
SIRT7
DUS1L
LRRC45
|
| nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain |
FASN
PCYT2
MIR4525
P4HB
HEXDC
TBCD
BAHCC1
C17orf62
LINC00482
SLC16A3
MIR6787
NPLOC4
OXLD1
SLC25A10
ASPSCR1
WDR45B
TEX19
ARHGDIA
CD7
TMEM105
NPB
RAC3
MIR6786
ACTG1
MCRIP1
CCDC137
ALYREF
NOTUM
LOC101929511
C17orf89
FN3K
MIR3186
SIRT7
MIR4740
AATK
MAFG-AS1
CSNK1D
ZNF750
SECTM1
LOC105371944
MRPL12
AATK-AS1
CCDC57
TEPSIN
LOC105371925
CEP131
NARF
PDE6G
LOC101929552
GPS1
FOXK2
UTS2R
ANAPC11
MYADML2
OGFOD3
ARL16
PPP1R27
LOC105376790
DUS1L
HGS
LOC100130370
DCXR
STRA13
SLC38A10
PYCR1
LOC105376791
MAFG
FSCN2
TSPAN10
RFNG
FAAP100
FN3KRP
B3GNTL1
GCGR
RAB40B
LRRC45
SNORD134
|
| nsv457975 | Chr.17:81991355 - 82086850 on Build GRCh38 | Loss |
FASN
RFNG
ASPSCR1
DCXR
STRA13
DUS1L
RAC3
GPS1
LRRC45
|
| nsv470620 | Chr.17:81516973 - 82064485 on Build GRCh38 | Loss |
MAFG-AS1
PCYT2
P4HB
MRPL12
PDE6G
GPS1
ANAPC11
MYADML2
ARL16
PPP1R27
DUS1L
HGS
NPLOC4
OXLD1
SLC25A10
ASPSCR1
DCXR
ARHGDIA
STRA13
NPB
PYCR1
RAC3
MIR6786
MCRIP1
MAFG
FSCN2
CCDC137
TSPAN10
RFNG
ALYREF
FAAP100
NOTUM
GCGR
SIRT7
LRRC45
|
| dgv5800n54 | Chr.17:82013189 - 82035336 on Build GRCh38 | Loss |
ASPSCR1
STRA13
RAC3
LRRC45
|
| esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss |
FASN
PCYT2
MIR4525
P4HB
HEXDC
TBCD
C17orf62
SLC16A3
MIR6787
ASPSCR1
WDR45B
TEX19
ARHGDIA
CD7
NPB
RAC3
MCRIP1
ALYREF
NOTUM
LOC101929511
FN3K
SIRT7
MAFG-AS1
CSNK1D
ZNF750
SECTM1
LOC105371944
CCDC57
NARF
LOC101929552
GPS1
FOXK2
UTS2R
ANAPC11
MYADML2
OGFOD3
PPP1R27
LOC105376790
DUS1L
METRNL
DCXR
STRA13
PYCR1
LOC105376791
MAFG
RFNG
FN3KRP
B3GNTL1
RAB40B
LRRC45
SNORD134
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
Back To Top