Genomic Map
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Target Gene Details
Entrez Gene ID: | 79058 |
Gene Name: | ASPSCR1, UBX domain containing tether for SLC2A4 |
Gene Aliases: |
ASPCR1, ASPL, ASPS, RCC17, TUG, UBXD9, UBXN9 |
Location: |
Chr.17:81977550-82018929 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 19 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ASPSCR1 | XM_011523601.2 | XP_011521903.1 | ||
| XM_011523602.2 | XP_011521904.1 | |||
| XM_017025036.1 | XP_016880525.1 | |||
| XM_017025037.1 | XP_016880526.1 | |||
| XM_017025038.1 | XP_016880527.1 | |||
| XM_017025039.1 | XP_016880528.1 | |||
| XM_017025040.1 | XP_016880529.1 | |||
| XM_017025041.1 | XP_016880530.1 |
Target Gene Details
Entrez Gene ID: | 201254 |
Gene Name: | stimulated by retinoic acid 13 |
Gene Aliases: |
CENP-X, CENPX, D9, FAAP10, MHF2 |
Location: |
Chr.17:82018703-82022930 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| STRA13 | NM_001271006.1 | 5 | 598 | NP_001257935.1 |
| NM_001271007.1 | 4 | 529 | NP_001257936.1 | |
| NM_144998.3 | 4 | 544 | NP_659435.2 | |
| XM_005256339.2 | 5 | 750 | XP_005256396.1 | |
| XM_017024326.1 | 3 | 951 | XP_016879815.1 | |
| XM_017024327.1 | 4 | 823 | XP_016879816.1 | |
| XM_017024328.1 | 4 | 692 | XP_016879817.1 | |
| XM_017024329.1 | 3 | 638 | XP_016879818.1 | |
| BC009571.1 | 4 | 513 | AAH09571.1 | |
| BC011610.1 | 4 | 480 | AAH11610.1 | |
| BI837753.1 | 4 | 512 | ||
| BQ648002.1 | 1 | 233 | ||
| U95006.1 | 4 | 499 | AAB53638.1 | |
| U95007.1 | 4 | 484 | AAB53639.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv952392 | Chr.17:81885825 - 82065724 on Build GRCh38 | Deletion |
 MYADML2
MAFG-AS1
NPB
PYCR1
DUS1L
RFNG
DCXR
ALYREF
GPS1
RAC3
PCYT2
SIRT7
STRA13
LRRC45
NOTUM
ASPSCR1
MAFG
ANAPC11
|
| nsv576183 | Chr.17:81991355 - 82086850 on Build GRCh38 | Loss |
STRA13
DUS1L
LRRC45
RFNG
FASN
ASPSCR1
DCXR
GPS1
RAC3
|
| nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain |
PDE6G
MRPL12
DUS1L
SECTM1
HEXDC
C17orf62
ALYREF
LOC105376791
RAC3
PCYT2
GCGR
CD7
MCRIP1
HGS
OXLD1
MAFG
LOC105376790
LOC101929552
NPLOC4
CSNK1D
TEX19
ARL16
TMEM105
PPP1R27
MIR4740
UTS2R
SLC38A10
LOC100130370
MIR6787
SLC25A10
ARHGDIA
NOTUM
FAAP100
ANAPC11
WDR45B
TSPAN10
CEP131
P4HB
MYADML2
MIR4525
FN3K
AATK
RFNG
FASN
TEPSIN
C17orf89
B3GNTL1
MIR3186
STRA13
TBCD
SNORD134
OGFOD3
FSCN2
LOC105371944
LRRC45
LOC101929511
LOC105371925
ACTG1
CCDC137
RAB40B
AATK-AS1
MAFG-AS1
NPB
PYCR1
SLC16A3
CCDC57
DCXR
GPS1
FOXK2
NARF
BAHCC1
SIRT7
LINC00482
ZNF750
ASPSCR1
MIR6786
FN3KRP
|
| nsv470620 | Chr.17:81516973 - 82064485 on Build GRCh38 | Loss |
TSPAN10
P4HB
MYADML2
PDE6G
MRPL12
DUS1L
RFNG
ALYREF
RAC3
PCYT2
STRA13
GCGR
MCRIP1
FSCN2
HGS
LRRC45
OXLD1
CCDC137
MAFG
NPLOC4
MAFG-AS1
NPB
PYCR1
ARL16
DCXR
GPS1
PPP1R27
SIRT7
SLC25A10
ARHGDIA
NOTUM
ASPSCR1
FAAP100
MIR6786
ANAPC11
|
| dgv5800n54 | Chr.17:82013189 - 82035336 on Build GRCh38 | Loss |
STRA13
LRRC45
ASPSCR1
RAC3
|
| esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss |
DUS1L
SECTM1
HEXDC
C17orf62
ALYREF
LOC105376791
RAC3
PCYT2
CD7
MCRIP1
MAFG
LOC105376790
LOC101929552
CSNK1D
METRNL
TEX19
PPP1R27
UTS2R
MIR6787
ARHGDIA
NOTUM
ANAPC11
WDR45B
P4HB
MYADML2
MIR4525
FN3K
RFNG
FASN
B3GNTL1
STRA13
TBCD
SNORD134
OGFOD3
LOC105371944
LRRC45
LOC101929511
RAB40B
MAFG-AS1
NPB
PYCR1
SLC16A3
CCDC57
DCXR
GPS1
FOXK2
NARF
SIRT7
ZNF750
ASPSCR1
FN3KRP
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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