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See other SPATA22 CNV Assays ›
Gene Symbol
SPATA22
Assay Reference Genome
Location

Chr.17:3448869 on build GRCh38
Cytoband
17p13.2
Assay ID Hs03072565_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84690

Gene Name:

 spermatogenesis associated 22

Gene Aliases:

 NYD-SP20, NYDSP20

Location:

 Chr.17:3440011-3513852 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA22 NM_001170695.1 6 786 NP_001164166.1
NM_001170696.1 5 657 NP_001164167.1
NM_001170697.1 6 792 NP_001164168.1
NM_001170698.1 6 807 NP_001164169.1
NM_001170699.1 6 1026 NP_001164170.1
NM_001321336.1 6 1076 NP_001308265.1
NM_001321337.1 6 1124 NP_001308266.1
NM_032598.4 6 848 NP_115987.2
AF367472.1 6 740 AAK53408.1
AK295299.1 6 1076
AK301892.1 6 992
AY032684.1 5 606 AAK51120.1
AY035867.1 6 789 AAK61373.1
AY035868.1 6 848 AAK61374.1
BC029483.1 6 733 AAH29483.1
BI463957.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss OR3A2 OR3A3 OR3A1 OR1D4 TRPV3 OR1A1 TRPV1 OR3A4P SPATA22 OR1A2 OR1E2 ASPA OR1E1
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain ATP2A3 OR3A2 OR3A1 OR1D2 ITGAE P2RX1 OR1A1 LOC105371592 SHPK CLUH TAX1BP3 ASPA OR1E1 P2RX5 OR3A3 EMC6 LOC101927911 CCDC92B P2RX5-TAX1BP3 OR1D4 OR1D5 TRPV3 RAP1GAP2 MIR6776 LOC105371591 TRPV1 MIR1253 OR1G1 NCBP3 PAFAH1B1 OR3A4P CTNS SPATA22 OR1A2 OR1E2 GSG2 CAMKK1
nsv574232 Chr.17:3254715 - 3503170 on Build GRCh38 Gain OR3A2 OR3A3 OR3A1 OR3A4P SPATA22 OR1E2 ASPA OR1E1
esv2660206 Chr.17:2679367 - 3519614 on Build GRCh38 Deletion OR3A2 OR3A3 LOC101927911 OR3A1 CCDC92B OR1D2 OR1D4 OR1D5 TRPV3 RAP1GAP2 MIR6776 LOC105371591 OR1A1 MIR1253 OR1G1 PAFAH1B1 OR3A4P LOC105371592 CLUH SPATA22 OR1A2 OR1E2 ASPA OR1E1
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain OR3A2 P2RX5 OR3A3 EMC6 P2RX5-TAX1BP3 TRPV3 ITGAE TRPV1 NCBP3 CTNS SHPK SPATA22 TAX1BP3 OR1E2 GSG2 ASPA OR1E1 CAMKK1
nsv833341 Chr.17:3352243 - 3521390 on Build GRCh38 Loss OR3A2 OR3A3 TRPV3 SPATA22 OR1E2 ASPA OR1E1
nsv574236 Chr.17:3390044 - 3459775 on Build GRCh38 Gain OR3A3 SPATA22 OR1E2 OR1E1
nsv1059413 Chr.17:3365789 - 3453922 on Build GRCh38 Loss OR3A2 OR3A3 SPATA22 OR1E2 OR1E1
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss OR3A3 TRPV1 SHPK TRPV3 SPATA22 OR1E2 ASPA

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