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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:410035 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03079513_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 NP_001128525.1
NM_001135054.1 NP_001128526.1
NM_021805.2 NP_068577.2
XM_005253044.2 XP_005253101.1
XM_005253045.1 XP_005253102.1
XM_005253046.1 XP_005253103.1
XM_005253048.4 XP_005253105.1
XM_017018099.1 XP_016873588.1
XM_017018100.1 XP_016873589.1
AK025099.1 BAB15066.1
AK093427.1
AK172830.1 BAD18795.1
AY358342.1 AAQ88708.1
BC003591.1 AAH03591.1
BC025953.1 AAH25953.1
BC106007.1 AAI06008.1
DA963481.1
DB112269.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552823 Chr.11:409592 - 412359 on Build GRCh38 Loss SIGIRR
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss IFITM2 PHRF1 CDHR5 LMNTD2 HRAS IFITM1 PGGHG PTDSS2 RASSF7 PKP3 MIR210HG B4GALNT4 RNH1 MIR210 SIGIRR IFITM5 IFITM3 ANO9 LRRC56 LOC143666 IRF7 LOC101059906
nsv467633 Chr.11:366710 - 432436 on Build GRCh38 Loss PKP3 B4GALNT4 SIGIRR ANO9
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss CHID1 AP2A2 PHRF1 LOC171391 LMNTD2 PIDD1 CD151 HRAS TSPAN4 PDDC1 PKP3 CRACR2B B4GALNT4 MIR6744 SLC25A22 RNH1 MUC5AC SCT SIGIRR IRF7 MUC6 MUC5B LOC101927503 LOC101059906 SNORA52 TMEM80 POLR2L CEND1 CDHR5 PANO1 TALDO1 PNPLA2 PTDSS2 RASSF7 MIR210HG MUC2 TOLLIP EPS8L2 DRD4 MIR210 RPLP2 DEAF1 ANO9 LRRC56 LOC143666
esv3891907 Chr.11:409815 - 424291 on Build GRCh38 Loss SIGIRR ANO9
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss CHID1 AP2A2 PHRF1 LOC171391 LMNTD2 PIDD1 CD151 HRAS TSPAN4 PDDC1 TOLLIP-AS1 CRACR2B MIR6744 SLC25A22 RNH1 MUC5AC SCT SIGIRR IRF7 MUC6 MUC5B LOC101927503 LOC101059906 SNORA52 TMEM80 POLR2L CEND1 CDHR5 PANO1 TALDO1 PNPLA2 PTDSS2 RASSF7 MIR210HG MUC2 TOLLIP EPS8L2 DRD4 MIR210 RPLP2 DEAF1 ANO9 LRRC56 LOC143666
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain PKP3 B4GALNT4 SIGIRR ANO9
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion PKP3 B4GALNT4 RNH1 SIGIRR ANO9 PTDSS2
dgv1012n100 Chr.11:198510 - 427836 on Build GRCh38 Gain NLRP6 IFITM2 PSMD13 ODF3 SIRT3 IFITM1 RIC8A PGGHG BET1L PKP3 B4GALNT4 SIGIRR IFITM5 IFITM3 ANO9 MIR6743
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion PKP3 B4GALNT4 SIGIRR ANO9 PTDSS2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CHID1 AP2A2 PHRF1 LOC171391 LMNTD2 PIDD1 CD151 HRAS TSPAN4 PDDC1 PKP3 CRACR2B B4GALNT4 SLC25A22 RNH1 SCT SIGIRR IRF7 LOC101059906 SNORA52 TMEM80 POLR2L CEND1 CDHR5 PANO1 TALDO1 PNPLA2 PTDSS2 RASSF7 MIR210HG EPS8L2 DRD4 MIR210 RPLP2 DEAF1 ANO9 LRRC56 LOC143666

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