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See other EGFL8 CNV Assays ›
Gene Symbol
EGFL8
Assay Reference Genome
Location

Chr.6:32167119 on build GRCh38
Cytoband
6p21.32
Assay ID Hs03083993_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 80864

Gene Name:

 EGF like domain multiple 8

Gene Aliases:

 C6orf8, NG3

Location:

 Chr.6:32164605-32168285 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EGFL8 NM_030652.3 NP_085155.1
NR_037860.1
AB190520.1 BAD51398.1
AK126457.1
AY358139.1 AAQ88506.1
BC035574.1 AAH35574.1
BC052591.1 AAH52591.1

Target Gene Details

Entrez Gene ID:

 100532746

Gene Name:

 PPT2-EGFL8 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:32153999-32168285 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2-EGFL8 NR_037861.1
AB209572.1 BAD92809.1
AF020544.1 AAB80731.1
AK307427.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss TNXB MIR6833 EGFL8 PBX2 LOC100507547 PPT2-EGFL8 ATF6B AGPAT1 PPT2 FKBPL MIR6721 NOTCH4 GPSM3 PRRT1 AGER RNF5
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss TNXB PBX2 SKIV2L HLA-DRB5 STK19 BTNL2 AGPAT1 PPT2 NELFE HLA-DRB1 MIR1236 MIR6721 C4A NOTCH4 C6orf10 PRRT1 C6orf48 DXO PPT2-EGFL8 ZBTB12 CYP21A1P SNORD52 FKBPL C2-AS1 NEU1 GPSM3 AGER MIR6833 LOC100507547 HSPA1A CFB EHMT2 TNXA C4B HLA-DQA1 HLA-DRA RNF5 EGFL8 HLA-DQB1 C2 ATF6B SNORD48 HLA-DRB6 HSPA1B HCG23 LOC101929163 CYP21A2 SLC44A4 HLA-DQB1-AS1
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss TNXB MIR6833 PBX2 LOC100507547 HLA-DRB5 BTNL2 AGPAT1 TNXA PPT2 HLA-DRB1 MIR6721 C4A C4B NOTCH4 C6orf10 HLA-DQA1 PRRT1 HLA-DRA RNF5 EGFL8 PPT2-EGFL8 MIR3135B HLA-DQB1 ATF6B HLA-DQA2 HLA-DRB6 CYP21A1P HCG23 LOC101929163 CYP21A2 FKBPL HLA-DQB1-AS1 GPSM3 AGER HLA-DQB2
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss TNXB MIR6833 PBX2 SKIV2L LOC100507547 STK19 CFB AGPAT1 TNXA PPT2 NELFE MIR1236 MIR6721 C4A C4B NOTCH4 PRRT1 RNF5 DXO EGFL8 PPT2-EGFL8 C2 ATF6B CYP21A1P CYP21A2 FKBPL C2-AS1 GPSM3 AGER
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion TNXB MCCD1 PBX2 SKIV2L LTB HLA-DRB5 STK19 LY6G6C ABHD16A DDX39B-AS1 BAG6 LST1 CSNK2B DDAH2 SNORA38 BTNL2 AGPAT1 PPT2 NELFE HLA-DRB1 VARS MIR1236 SNORD84 MIR6721 C4A NOTCH4 C6orf10 SAPCD1-AS1 PRRT1 C6orf48 DXO PPT2-EGFL8 TNF ZBTB12 LY6G5C CYP21A1P PRRC2A NFKBIL1 SNORD52 FKBPL C6orf25 HCG26 SAPCD1 C2-AS1 NEU1 DDX39B HCP5 GPSM3 AGER LY6G6D HSPA1L MIR6833 LOC100507547 CLIC1 HSPA1A ATP6V1G2-DDX39B APOM GPANK1 LSM2 CFB MSH5 EHMT2 TNXA ATP6V1G2 NCR3 C4B VWA7 MSH5-SAPCD1 HLA-DRA RNF5 LOC100287329 EGFL8 LOC102725068 AIF1 LY6G6E SNORD117 MIR4646 C2 ATF6B SNORD48 HLA-DRB6 HSPA1B HCG23 LOC101929163 CYP21A2 MICB C6orf47 LY6G5B LTA MIR6832 SLC44A4 LY6G6F
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion TNXB PBX2 LTB HLA-DRB5 STK19 LY6G6C ABHD16A DDX39B-AS1 RING1 DDAH2 SNORA38 HLA-DOB HCG24 NELFE MIR6873 VARS MIR6721 NOTCH4 SAPCD1-AS1 CUTA DXO PPT2-EGFL8 ZBTB12 MIR6834 RGL2 CYP21A1P PRRC2A NFKBIL1 SNORD52 KIFC1 FKBPL HCG26 SAPCD1 HLA-DPB1 DDX39B GPSM3 HLA-DQB2 HLA-DMB HSPA1L ATP6V1G2-DDX39B TAP1 APOM SYNGAP1 GPANK1 WDR46 B3GALT4 EHMT2 HLA-DOA ATP6V1G2 NCR3 VWA7 MSH5-SAPCD1 HLA-DRA RNF5 HLA-DMA EGFL8 LOC102725068 AIF1 LY6G6E TAP2 C2 SNORD48 HSPA1B LOC100294145 ZBTB9 PHF1 HCG25 C6orf47 LTA SLC44A4 HLA-DQB1-AS1 LY6G6F COL11A2 HLA-DPB2 ZBTB22 MCCD1 SKIV2L PSMB8 BAG6 LST1 CSNK2B DAXX BTNL2 RPS18 AGPAT1 PPT2 HLA-DRB1 RXRB MIR1236 SNORD84 C4A C6orf10 PRRT1 TAPBP C6orf48 TNF MIR3135B LY6G5C HLA-DPA1 PFDN6 C6orf25 C2-AS1 NEU1 HCP5 PSMB8-AS1 AGER LY6G6D MIR6833 LOC100507547 CLIC1 HSPA1A MIR219A1 HSD17B8 LSM2 CFB MSH5 VPS52 PSMB9 TNXA SLC39A7 C4B HLA-DQA1 LOC100287329 MIR5004 SNORD117 HLA-DQB1 MIR4646 ATF6B HLA-DQA2 HLA-DRB6 PPP1R2P1 HCG23 LOC101929163 CYP21A2 MICB LY6G5B MIR6832 BRD2
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss TNXB MIR6833 EGFL8 PBX2 LOC100507547 PPT2-EGFL8 ATF6B AGPAT1 PPT2 FKBPL MIR6721 NOTCH4 GPSM3 PRRT1 AGER RNF5
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion TNXB PBX2 LTB HLA-DRB5 STK19 LY6G6C ABHD16A DDX39B-AS1 RING1 DDAH2 SNORA38 HLA-DOB HCG24 NELFE MIR6873 VARS MIR6721 NOTCH4 SAPCD1-AS1 CUTA DXO PPT2-EGFL8 ZBTB12 MIR6834 RGL2 CYP21A1P PRRC2A NFKBIL1 SNORD52 KIFC1 FKBPL HCG26 SAPCD1 HLA-DPB1 DDX39B GPSM3 HLA-DQB2 HLA-DMB HSPA1L ATP6V1G2-DDX39B TAP1 APOM SYNGAP1 GPANK1 WDR46 B3GALT4 EHMT2 HLA-DOA ATP6V1G2 NCR3 VWA7 MSH5-SAPCD1 HLA-DRA RNF5 HLA-DMA EGFL8 LOC102725068 AIF1 LY6G6E TAP2 C2 SNORD48 HSPA1B LOC100294145 ZBTB9 PHF1 HCG25 C6orf47 LTA SLC44A4 HLA-DQB1-AS1 LY6G6F COL11A2 HLA-DPB2 ZBTB22 MCCD1 SKIV2L PSMB8 BAG6 LST1 CSNK2B DAXX BTNL2 RPS18 AGPAT1 PPT2 HLA-DRB1 RXRB MIR1236 SNORD84 C4A C6orf10 PRRT1 TAPBP C6orf48 TNF MIR3135B LY6G5C HLA-DPA1 PFDN6 C6orf25 C2-AS1 NEU1 HCP5 PSMB8-AS1 AGER LY6G6D MIR6833 LOC100507547 CLIC1 HSPA1A MIR219A1 HSD17B8 LSM2 CFB MSH5 VPS52 PSMB9 TNXA SLC39A7 C4B HLA-DQA1 LOC100287329 MIR5004 SNORD117 HLA-DQB1 MIR4646 ATF6B HLA-DQA2 HLA-DRB6 PPP1R2P1 HCG23 LOC101929163 CYP21A2 MICB LY6G5B MIR6832 BRD2
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss TNXB MCCD1 PBX2 SKIV2L LTB STK19 LY6G6C ABHD16A DDX39B-AS1 BAG6 LST1 CSNK2B DDAH2 SNORA38 BTNL2 AGPAT1 PPT2 NELFE VARS MIR1236 SNORD84 MIR6721 C4A NOTCH4 C6orf10 SAPCD1-AS1 PRRT1 C6orf48 DXO PPT2-EGFL8 TNF ZBTB12 LY6G5C CYP21A1P PRRC2A MIR6891 NFKBIL1 SNORD52 FKBPL C6orf25 HCG26 SAPCD1 C2-AS1 NEU1 DDX39B HCP5 GPSM3 AGER LY6G6D HSPA1L MIR6833 LOC100507547 CLIC1 HSPA1A ATP6V1G2-DDX39B APOM GPANK1 LSM2 CFB MSH5 EHMT2 TNXA ATP6V1G2 NCR3 C4B VWA7 MSH5-SAPCD1 HLA-DRA RNF5 LOC100287329 MICA EGFL8 LOC102725068 AIF1 LY6G6E SNORD117 HLA-B MIR4646 C2 ATF6B SNORD48 HSPA1B HCG23 LOC101929163 CYP21A2 MICB C6orf47 LY6G5B LTA MIR6832 SLC44A4 LY6G6F

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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