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See other POU5F1 CNV Assays ›
Gene Symbol
POU5F1
Assay Reference Genome
Location

Chr.6:31170205 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03175701_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5460

Gene Name:

 POU class 5 homeobox 1

Gene Aliases:

 OCT3, OCT4, OTF-3, OTF3, OTF4, Oct-3, Oct-4

Location:

 Chr.6:31164337-31170693 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
POU5F1 NM_002701.5 NP_002692.2
AB971680.1
AB971681.1
AM851116.1
BC117435.1
BC117437.1
CD247724.1
DQ486517.1
FM177951.1
FM177952.1
FM177953.1
FM177954.1
FM177955.1
FM177956.1
FM177957.1
FM177958.1
FM177959.1
FM177960.1
FM177961.1
FM177962.1
FM177963.1
FM177964.1
FM177965.1
FM177968.1
GU480808.1
GU480809.1
GU480810.1
GU480811.1
GU480812.1
GU480813.1
GU480815.1
GU480816.1
GU480817.1
GU480818.1
GU480819.1
GU480820.1
GU480821.1
GU480822.1
GU480823.1
GU480824.1
GU480825.1
GU480826.1
GU480827.1
GU480828.1
GU480829.1
GU480830.1
HQ122658.1
HQ122659.1
HQ122660.1
HQ122661.1
HQ122662.1
HQ122663.1
HQ122664.1
HQ122665.1
HQ122666.1
HQ122667.1
HQ122668.1
HQ122669.1
HQ122670.1
HQ122671.1
HQ122672.1
HQ122673.1
HQ122674.1
HQ122675.1
Z11898.1 CAA77951.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv525933 Chr.6:31113428 - 31174468 on Build GRCh38 Loss TCF19 PSORS1C3 CDSN CCHCR1 PSORS1C2 POU5F1 PSORS1C1
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion IER3 OR12D2 HLA-E OR2H2 OR2J2 HCG8 DHX16 HLA-F-AS1 OR14J1 MICA HLA-J FLOT1 HLA-G TRIM39 MIR4640 TCF19 TRIM15 MDC1 OR5V1 TRIM26 TUBB OR11A1 MIR877 MOG POU5F1 C6orf15 ATAT1 PPP1R10 MUC21 HCG22 HCG4B HLA-H OR10C1 HCG20 MDC1-AS1 HCG17 ABCF1 VARS2 TRIM39-RPP21 TRIM40 HCG18 ZNRD1ASP PPP1R18 LOC101929006 C6orf136 DDR1 LOC554223 CCHCR1 NRM PPP1R11 DPCR1 LOC105375014 GNL1 PRR3 HLA-K LINC01015 SFTA2 CDSN HLA-B OR2H1 ZNRD1 PSORS1C2 TRIM31 MUC22 SNORD32B PSORS1C1 TRIM31-AS1 GTF2H4 HLA-A HLA-C RPP21 OR12D3 TRIM10 RNF39 LINC00243 MRPS18B HCG9 UBD PSORS1C3 GABBR1 HLA-L ZFP57 MIR6891 MAS1L HLA-F IFITM4P HCG4 HCG27
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss IER3 PPP1R18 HLA-E C6orf136 DDR1 CCHCR1 NRM DPCR1 DHX16 LOC105375014 GNL1 PRR3 FLOT1 SFTA2 MIR4640 TCF19 MDC1 CDSN TUBB MIR877 PSORS1C2 POU5F1 MUC22 C6orf15 PSORS1C1 ATAT1 PPP1R10 GTF2H4 HLA-C MUC21 HCG22 LINC00243 HCG20 MDC1-AS1 MRPS18B ABCF1 PSORS1C3 VARS2 HCG27
nsv428140 Chr.6:31060513 - 31494329 on Build GRCh38 Gain+Loss HLA-C CCHCR1 LOC102725068 MICA TCF19 HCG26 PSORS1C3 CDSN HLA-B MIR6891 PSORS1C2 POU5F1 HCG27 HCP5 C6orf15 PSORS1C1
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion IER3 OR12D2 HLA-E OR2H2 OR2J2 HCG8 DHX16 LINC00533 HLA-F-AS1 OR14J1 OR2J3 HLA-J FLOT1 HLA-G TRIM39 MIR4640 TCF19 TRIM15 MDC1 OR5V1 HCG14 TRIM26 TUBB OR11A1 MIR877 LINC01623 MOG POU5F1 ZNF311 C6orf15 ATAT1 PPP1R10 MUC21 HCG22 LOC100129636 HCG4B HLA-H OR10C1 HCG20 MDC1-AS1 HCG17 ABCF1 VARS2 TRIM27 TRIM39-RPP21 TRIM40 HCG18 OR2B3 ZNRD1ASP PPP1R18 LOC101929006 C6orf136 DDR1 LOC554223 CCHCR1 NRM PPP1R11 DPCR1 LOC105375014 GNL1 PRR3 HLA-K LINC01015 SFTA2 CDSN OR2H1 ZNRD1 PSORS1C2 TRIM31 MUC22 SNORD32B PSORS1C1 TRIM31-AS1 GTF2H4 HLA-A RPP21 OR12D3 HCG16 TRIM10 RNF39 OR2W1 LINC00243 MRPS18B HCG9 UBD PSORS1C3 GABBR1 HLA-L ZFP57 LINC01556 MAS1L HLA-F IFITM4P HCG4 HCG27
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion IER3 HLA-E HCG8 DHX16 HLA-F-AS1 HLA-J FLOT1 HLA-G TRIM39 MIR4640 TCF19 TRIM15 MDC1 TRIM26 TUBB MIR877 POU5F1 C6orf15 ATAT1 PPP1R10 MUC21 HCG22 HCG4B HLA-H HCG20 MDC1-AS1 HCG17 ABCF1 VARS2 TRIM39-RPP21 TRIM40 HCG18 ZNRD1ASP PPP1R18 C6orf136 DDR1 LOC554223 CCHCR1 NRM PPP1R11 DPCR1 LOC105375014 GNL1 PRR3 HLA-K SFTA2 CDSN ZNRD1 PSORS1C2 TRIM31 MUC22 PSORS1C1 TRIM31-AS1 GTF2H4 HLA-A HLA-C RPP21 TRIM10 RNF39 LINC00243 MRPS18B HCG9 PSORS1C3 HLA-L HLA-F IFITM4P HCG4 HCG27
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss IER3 HLA-E HCG8 DHX16 HLA-J FLOT1 TRIM39 MIR4640 TCF19 TRIM15 MDC1 TRIM26 TUBB MIR877 POU5F1 C6orf15 ATAT1 PPP1R10 MUC21 HCG22 HCG4B HLA-H HCG20 MDC1-AS1 HCG17 ABCF1 VARS2 TRIM39-RPP21 TRIM40 HCG18 ZNRD1ASP PPP1R18 C6orf136 DDR1 CCHCR1 NRM PPP1R11 DPCR1 LOC105375014 GNL1 PRR3 HLA-K SFTA2 CDSN ZNRD1 PSORS1C2 TRIM31 MUC22 PSORS1C1 TRIM31-AS1 GTF2H4 HLA-A HLA-C RPP21 TRIM10 RNF39 LINC00243 MRPS18B HCG9 PSORS1C3 HLA-L HCG27
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion IER3 PPP1R18 HLA-E C6orf136 DDR1 CCHCR1 NRM DPCR1 DHX16 LOC105375014 GNL1 PRR3 FLOT1 SFTA2 MIR4640 TCF19 MDC1 CDSN TUBB MIR877 PSORS1C2 POU5F1 MUC22 C6orf15 PSORS1C1 ATAT1 PPP1R10 GTF2H4 HLA-C MUC21 HCG22 LINC00243 HCG20 MDC1-AS1 MRPS18B ABCF1 PSORS1C3 VARS2 HCG27
dgv1174e214 Chr.6:31139843 - 31176217 on Build GRCh38 Gain TCF19 PSORS1C3 CCHCR1 POU5F1 PSORS1C1
esv3608532 Chr.6:31163674 - 31304530 on Build GRCh38 Gain TCF19 PSORS1C3 HLA-C POU5F1 HCG27
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication IER3 HLA-E LOC102725068 HCG8 DHX16 MICA HLA-J FLOT1 TRIM39 MIR4640 TCF19 TRIM15 MDC1 TRIM26 TUBB MIR877 POU5F1 C6orf15 ATAT1 PPP1R10 MUC21 HCG22 HCG20 MDC1-AS1 HCG17 HCG26 ABCF1 VARS2 TRIM39-RPP21 TRIM40 HCG18 ZNRD1ASP PPP1R18 C6orf136 DDR1 CCHCR1 NRM PPP1R11 DPCR1 LOC105375014 GNL1 PRR3 SFTA2 CDSN HLA-B ZNRD1 PSORS1C2 TRIM31 MUC22 PSORS1C1 TRIM31-AS1 GTF2H4 HLA-C RPP21 TRIM10 RNF39 LINC00243 MRPS18B PSORS1C3 HLA-L MIR6891 HCG27 HCP5

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