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Gene Symbol
POU5F1
Assay Reference Genome
Location

Chr.6:31165138 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03180315_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5460

Gene Name:

 POU class 5 homeobox 1

Gene Aliases:

 OCT3, OCT4, OTF-3, OTF3, OTF4, Oct-3, Oct-4

Location:

 Chr.6:31164337-31170693 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
POU5F1 NM_001173531.2 NP_001167002.1
NM_001285986.1 NP_001272915.1
NM_001285987.1 NP_001272916.1
NM_002701.5 NP_002692.2
NM_203289.5 NP_976034.4
AA205411.1
AB971680.1
AB971681.1
BC117435.1
BC117437.1
DQ486514.1
DQ486515.1
DQ486516.1
DQ486517.1
GU480808.1
GU480809.1
GU480810.1
GU480811.1
GU480812.1
GU480813.1
GU480815.1
GU480816.1
GU480817.1
GU480818.1
GU480819.1
GU480820.1
GU480821.1
GU480822.1
GU480823.1
GU480824.1
GU480825.1
GU480826.1
GU480827.1
GU480828.1
GU480829.1
GU480830.1
HQ122658.1
HQ122659.1
HQ122660.1
HQ122661.1
HQ122662.1
HQ122663.1
HQ122664.1
HQ122665.1
HQ122666.1
HQ122667.1
HQ122668.1
HQ122669.1
HQ122670.1
HQ122671.1
HQ122672.1
HQ122673.1
HQ122674.1
HQ122675.1
KF880691.1
KF880692.1
KF880693.1
KJ624996.1
KJ700311.1
KM188057.1
S81255.1 AAB35990.1
Z11898.1 CAA77951.1
Z11899.1 CAA77952.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv525933 Chr.6:31113428 - 31174468 on Build GRCh38 Loss PSORS1C1 PSORS1C3 PSORS1C2 CDSN POU5F1 TCF19 CCHCR1
nsv428140 Chr.6:31060513 - 31494329 on Build GRCh38 Gain+Loss HCP5 PSORS1C1 PSORS1C3 MICA MIR6891 HCG27 PSORS1C2 LOC102725068 HCG26 TCF19 CCHCR1 HLA-B HLA-C CDSN C6orf15 POU5F1
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion PSORS1C2 C6orf136 TUBB CCHCR1 DPCR1 FLOT1 ABCF1 DDR1 VARS2 MIR4640 POU5F1 PRR3 SFTA2 GNL1 PPP1R10 MDC1 MUC21 PSORS1C1 PSORS1C3 MRPS18B HCG27 MIR877 HCG20 IER3 ATAT1 MUC22 HLA-E HCG22 TCF19 DHX16 PPP1R18 HLA-C LOC105375014 LINC00243 MDC1-AS1 CDSN NRM C6orf15 GTF2H4
dgv1174e214 Chr.6:31139843 - 31176217 on Build GRCh38 Gain PSORS1C1 PSORS1C3 POU5F1 TCF19 CCHCR1
esv3608532 Chr.6:31163674 - 31304530 on Build GRCh38 Gain PSORS1C3 HCG27 HLA-C POU5F1 TCF19
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion PSORS1C2 C6orf136 HLA-F-AS1 TUBB HLA-J HCG18 UBD CCHCR1 DPCR1 FLOT1 LINC01015 DDR1 TRIM31 OR12D2 OR2J2 VARS2 HCG8 HLA-F TRIM39 HLA-L MDC1 MUC21 PSORS1C1 LOC554223 MRPS18B LOC101929006 MAS1L OR5V1 ATAT1 MUC22 TRIM26 HCG4 HLA-E GABBR1 TCF19 PPP1R11 DHX16 HLA-A HLA-B IFITM4P TRIM39-RPP21 OR2H2 NRM C6orf15 RNF39 TRIM31-AS1 TRIM40 OR11A1 ZNRD1 TRIM10 MICA MIR6891 HLA-H ZFP57 ABCF1 OR14J1 MIR4640 POU5F1 PRR3 SFTA2 GNL1 HLA-G OR2H1 HCG17 PPP1R10 PSORS1C3 HCG27 MIR877 HCG20 IER3 SNORD32B HCG9 OR10C1 ZNRD1ASP RPP21 HCG22 PPP1R18 HLA-K HCG4B HLA-C OR12D3 LOC105375014 MOG LINC00243 MDC1-AS1 CDSN TRIM15 GTF2H4
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss PSORS1C2 C6orf136 TUBB CCHCR1 DPCR1 FLOT1 ABCF1 DDR1 VARS2 MIR4640 POU5F1 PRR3 SFTA2 GNL1 PPP1R10 MDC1 MUC21 PSORS1C1 PSORS1C3 MRPS18B HCG27 MIR877 HCG20 IER3 ATAT1 MUC22 HLA-E HCG22 TCF19 DHX16 PPP1R18 HLA-C LOC105375014 LINC00243 MDC1-AS1 CDSN NRM C6orf15 GTF2H4
nsv524061 Chr.6:31139310 - 31166166 on Build GRCh38 Loss PSORS1C1 PSORS1C2 POU5F1 TCF19 CCHCR1
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion PSORS1C2 OR2J3 C6orf136 HLA-F-AS1 TUBB HLA-J ZNF311 HCG18 UBD CCHCR1 DPCR1 FLOT1 LINC01015 DDR1 TRIM31 OR12D2 OR2J2 VARS2 HCG8 HLA-F TRIM39 HLA-L MDC1 MUC21 PSORS1C1 LOC554223 MRPS18B LINC00533 LOC101929006 MAS1L OR5V1 ATAT1 MUC22 TRIM26 HCG4 HLA-E GABBR1 TCF19 PPP1R11 DHX16 HLA-A IFITM4P TRIM39-RPP21 HCG14 OR2H2 NRM C6orf15 RNF39 TRIM31-AS1 OR2W1 TRIM40 OR11A1 ZNRD1 TRIM10 HLA-H LINC01623 TRIM27 ZFP57 ABCF1 OR14J1 MIR4640 POU5F1 PRR3 SFTA2 GNL1 HLA-G OR2H1 LOC100129636 HCG17 PPP1R10 PSORS1C3 HCG27 MIR877 HCG20 OR2B3 IER3 SNORD32B HCG9 OR10C1 ZNRD1ASP RPP21 HCG22 LINC01556 PPP1R18 HLA-K HCG4B OR12D3 LOC105375014 MOG LINC00243 MDC1-AS1 CDSN TRIM15 GTF2H4 HCG16
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion PSORS1C2 C6orf136 HLA-F-AS1 TUBB HLA-J HCG18 CCHCR1 DPCR1 FLOT1 DDR1 TRIM31 VARS2 HCG8 HLA-F TRIM39 HLA-L MDC1 MUC21 PSORS1C1 LOC554223 MRPS18B ATAT1 MUC22 TRIM26 HCG4 HLA-E TCF19 PPP1R11 DHX16 HLA-A IFITM4P TRIM39-RPP21 NRM C6orf15 RNF39 TRIM31-AS1 TRIM40 ZNRD1 TRIM10 HLA-H ABCF1 MIR4640 POU5F1 PRR3 SFTA2 GNL1 HLA-G HCG17 PPP1R10 PSORS1C3 HCG27 MIR877 HCG20 IER3 HCG9 ZNRD1ASP RPP21 HCG22 PPP1R18 HLA-K HCG4B HLA-C LOC105375014 LINC00243 MDC1-AS1 CDSN TRIM15 GTF2H4
nsv970105 Chr.6:31163935 - 31166130 on Build GRCh38 Duplication POU5F1 TCF19
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss PSORS1C2 C6orf136 TUBB HLA-J HCG18 CCHCR1 DPCR1 FLOT1 DDR1 TRIM31 VARS2 HCG8 TRIM39 HLA-L MDC1 MUC21 PSORS1C1 MRPS18B ATAT1 MUC22 TRIM26 HLA-E TCF19 PPP1R11 DHX16 HLA-A TRIM39-RPP21 NRM C6orf15 RNF39 TRIM31-AS1 TRIM40 ZNRD1 TRIM10 HLA-H ABCF1 MIR4640 POU5F1 PRR3 SFTA2 GNL1 HCG17 PPP1R10 PSORS1C3 HCG27 MIR877 HCG20 IER3 HCG9 ZNRD1ASP RPP21 HCG22 PPP1R18 HLA-K HCG4B HLA-C LOC105375014 LINC00243 MDC1-AS1 CDSN TRIM15 GTF2H4
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication PSORS1C2 C6orf136 TUBB HLA-J HCG18 HCG26 CCHCR1 DPCR1 FLOT1 DDR1 TRIM31 VARS2 HCG8 TRIM39 HLA-L HCP5 MDC1 MUC21 PSORS1C1 MRPS18B LOC102725068 ATAT1 MUC22 TRIM26 HLA-E TCF19 PPP1R11 DHX16 HLA-B TRIM39-RPP21 NRM C6orf15 RNF39 TRIM31-AS1 TRIM40 ZNRD1 TRIM10 MICA MIR6891 ABCF1 MIR4640 POU5F1 PRR3 SFTA2 GNL1 HCG17 PPP1R10 PSORS1C3 HCG27 MIR877 HCG20 IER3 ZNRD1ASP RPP21 HCG22 PPP1R18 HLA-C LOC105375014 LINC00243 MDC1-AS1 CDSN TRIM15 GTF2H4

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