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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1299587 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03329507_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Within Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 9 1103 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss UBE2J2 SCNN1D ACAP3 MIR6726
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR429 MIR1302-2 FAAP20 ACAP3 C1orf159 MMP23A SSU72 CCNL2 TMEM88B LINC01128 CFAP74 LINC01342 PUSL1 CPTP LOC729737 AURKAIP1 CDK11A TTLL10 LOC100134822 LOC100287934 LOC100133331 MMP23B SDF4 LOC105378589 LOC105378949 OR4F29 AGRN DVL1 LOC100288069 OR4F16 LOC105378948 MXRA8 ATAD3C NOC2L FAM41C GNB1 LOC105378592 LOC100130417 LOC102725121 CALML6 MTND2P28 SKI SLC35E2B B3GALT6 ANKRD65 FNDC10 SCNN1D LOC107984841 PERM1 CPSF3L HES4 LOC101928626 PLEKHN1 NADK MIR6726 LOC105378591 LOC105378947 DDX11L1 LINC00115 MIR200A LOC148413 WASH7P MIR6808 LOC284600 TMEM52 VWA1 TNFRSF4 FAM138A PRKCZ TMEM240 FAM87B LOC102724312 CDK11B GABRD ISG15 MIR6727 SLC35E2 OR4F5 TAS1R3 MIR200B UBE2J2 RNF223 ATAD3A FAM132A LOC107985728 LOC100132287 LOC107985729 MIR6859-2 LOC100288175 MORN1 MIR6723 SAMD11 LOC100506504 MTND1P23 TNFRSF18 MIB2 TTLL10-AS1 MRPL20 KLHL17 MIR6859-1 ATAD3B LOC100129534
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss B3GALT6 UBE2J2 SDF4 SCNN1D ACAP3 MIR6726 FAM132A
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss MIR6727 PUSL1 CPSF3L ACAP3 MIR6726 MIR6808 DVL1 CPTP TAS1R3
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss SCNN1D ACAP3 MIR6726
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss B3GALT6 MIR429 LINC01342 SCNN1D MIR200A ACAP3 C1orf159 MIR200B TTLL10 TNFRSF18 UBE2J2 SDF4 TTLL10-AS1 TNFRSF4 RNF223 MIR6726 FAM132A
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication B3GALT6 MIR429 MIR6727 SCNN1D CPSF3L ACAP3 C1orf159 AGRN TAS1R3 MIR200B UBE2J2 RNF223 LOC105378948 MIR6726 FAM132A LINC01342 MIR200A PUSL1 LOC100288175 CPTP TTLL10 TNFRSF18 SDF4 TTLL10-AS1 TNFRSF4
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MIR6727 SCNN1D PUSL1 CPSF3L ACAP3 MIR6726 MIR6808 DVL1 CPTP TAS1R3 MXRA8 AURKAIP1
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss B3GALT6 MIR429 ANKRD65 FNDC10 SCNN1D PERM1 CPSF3L HES4 ACAP3 C1orf159 MMP23A SSU72 CCNL2 TMEM88B PLEKHN1 NADK MIR6726 LINC01128 LINC00115 LINC01342 MIR200A PUSL1 LOC148413 MIR6808 CPTP AURKAIP1 CDK11A TTLL10 LOC100287934 LOC284600 MMP23B SDF4 VWA1 TNFRSF4 TMEM240 FAM87B LOC102724312 CDK11B ISG15 MIR6727 SLC35E2 AGRN DVL1 TAS1R3 MIR200B LOC100288069 UBE2J2 RNF223 LOC105378948 MXRA8 ATAD3A FAM132A ATAD3C NOC2L LOC107985728 FAM41C LOC107985729 LOC100288175 SAMD11 TNFRSF18 LOC100130417 MIB2 TTLL10-AS1 MRPL20 KLHL17 ATAD3B SLC35E2B
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion B3GALT6 MIR429 ANKRD65 LOC102724312 CDK11B FNDC10 MIR6727 SCNN1D CPSF3L ACAP3 C1orf159 DVL1 TAS1R3 MIR200B SSU72 CCNL2 UBE2J2 TMEM88B MIR6726 MXRA8 ATAD3A FAM132A ATAD3C LINC01342 MIR200A PUSL1 LOC107985729 LOC148413 MIR6808 CPTP AURKAIP1 TTLL10 TNFRSF18 MMP23B SDF4 VWA1 MIB2 TTLL10-AS1 TNFRSF4 MRPL20 TMEM240 ATAD3B
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MIR6727 SCNN1D PUSL1 CPSF3L ACAP3 MIR6726 MIR6808 DVL1 CPTP TAS1R3 MXRA8
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6727 SCNN1D PUSL1 CPSF3L ACAP3 MIR6808 DVL1 CPTP TAS1R3 AURKAIP1 UBE2J2 MIR6726 MXRA8
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain B3GALT6 MIR429 ANKRD65 ISG15 MIR6727 SCNN1D PERM1 CPSF3L HES4 ACAP3 C1orf159 AGRN DVL1 TAS1R3 MIR200B CCNL2 UBE2J2 TMEM88B PLEKHN1 RNF223 LOC105378948 MIR6726 MXRA8 FAM132A NOC2L LOC107985728 LINC01342 MIR200A PUSL1 LOC148413 LOC100288175 MIR6808 CPTP AURKAIP1 SAMD11 TTLL10 TNFRSF18 LOC100130417 LOC284600 SDF4 TTLL10-AS1 TNFRSF4 MRPL20 KLHL17
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain B3GALT6 MIR429 MIR6727 SCNN1D MIR200A PUSL1 CPSF3L ACAP3 MIR200B TTLL10 TNFRSF18 UBE2J2 SDF4 TTLL10-AS1 TNFRSF4 MIR6726 FAM132A

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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