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See other PLEKHN1 CNV Assays ›
Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:967240 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03333540_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
XM_017002479.1 XP_016857968.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain RNF223 NOC2L LOC100288175 C1orf159 PLEKHN1 AGRN KLHL17 ISG15 LOC107985728 SAMD11 LOC105378948 LOC284600 HES4 PERM1 LOC100130417
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss RNF223 OR4F16 UBE2J2 LOC105378591 LOC284600 HES4 ATAD3B MIR6859-2 LOC100288175 LOC105378947 LOC729737 LOC107984841 VWA1 SDF4 MIR6723 CDK11B TTLL10 ATAD3C TNFRSF4 SSU72 PERM1 FAM41C LINC01128 FAM138A LOC101928626 SLC35E2B GABRD LOC105378949 GNB1 MXRA8 MIB2 WASH7P MTND1P23 OR4F5 ANKRD65 MTND2P28 MIR6808 FAM132A SAMD11 LOC105378589 MMP23B PRKCZ MIR6727 B3GALT6 TMEM88B MIR6726 MIR200A MIR6859-1 CPSF3L PUSL1 CFAP74 LOC100288069 LOC100287934 SLC35E2 FNDC10 LINC01342 MIR1302-2 MIR200B NOC2L MMP23A LINC00115 PLEKHN1 CALML6 AGRN MIR429 MRPL20 ISG15 AURKAIP1 LOC107985728 LOC100132287 LOC100506504 SKI LOC105378948 LOC107985729 CPTP CDK11A LOC102725121 LOC100133331 ATAD3A TNFRSF18 TMEM240 SCNN1D MORN1 CCNL2 NADK LOC100130417 LOC102724312 TTLL10-AS1 LOC148413 LOC100129534 LOC100134822 C1orf159 KLHL17 LOC105378592 FAAP20 OR4F29 TAS1R3 TMEM52 FAM87B ACAP3 DDX11L1 DVL1
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion RNF223 NOC2L LOC100288175 C1orf159 PLEKHN1 AGRN KLHL17 ISG15 LOC107985728 SAMD11 LOC105378948 LOC284600 HES4 PERM1 LOC100130417
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion SAMD11 NOC2L PLEKHN1 LOC284600 KLHL17 PERM1 LOC100130417 LOC107985728
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain FAM41C RNF223 TNFRSF18 MIR200A LOC284600 LINC01342 HES4 MIR200B LOC100130417 TTLL10-AS1 NOC2L LOC100288175 C1orf159 PLEKHN1 AGRN KLHL17 MIR429 ISG15 SDF4 LOC107985728 TTLL10 SAMD11 LOC105378948 TNFRSF4 PERM1
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC100133331 FAM41C RNF223 LINC01128 LOC101928626 OR4F16 LOC100288069 LOC100287934 LOC284600 HES4 MTND1P23 LOC100130417 NOC2L LOC100288175 LINC00115 C1orf159 LOC105378947 PLEKHN1 LOC107984841 MTND2P28 AGRN KLHL17 ISG15 LOC107985728 MIR6723 SAMD11 LOC105378948 PERM1 FAM87B
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss B3GALT6 RNF223 TMEM88B MIR6726 MIR200A CPSF3L PUSL1 LOC100288069 LOC100287934 SLC35E2 UBE2J2 FNDC10 LOC284600 LINC01342 HES4 ATAD3B MIR200B NOC2L LOC100288175 MMP23A LINC00115 PLEKHN1 VWA1 AGRN MIR429 MRPL20 ISG15 SDF4 AURKAIP1 LOC107985728 CDK11B TTLL10 ATAD3C LOC105378948 TNFRSF4 SSU72 LOC107985729 PERM1 CPTP CDK11A FAM41C LINC01128 ATAD3A TNFRSF18 TMEM240 SCNN1D SLC35E2B MXRA8 MIB2 CCNL2 NADK LOC100130417 LOC102724312 TTLL10-AS1 ANKRD65 LOC148413 C1orf159 MIR6808 KLHL17 FAM132A SAMD11 MMP23B TAS1R3 MIR6727 FAM87B ACAP3 DVL1
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss B3GALT6 FAM41C RNF223 LINC01128 TNFRSF18 MIR200A UBE2J2 LOC284600 LINC01342 HES4 MIR200B LOC100130417 TTLL10-AS1 NOC2L LOC100288175 LINC00115 C1orf159 PLEKHN1 AGRN KLHL17 FAM132A MIR429 ISG15 SDF4 LOC107985728 TTLL10 SAMD11 LOC105378948 TNFRSF4 PERM1 FAM87B
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain RNF223 NOC2L LOC100288175 C1orf159 PLEKHN1 AGRN KLHL17 ISG15 SAMD11 LOC105378948 LINC01342 HES4 PERM1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain B3GALT6 RNF223 TMEM88B MIR6726 TNFRSF18 SCNN1D MIR200A CPSF3L PUSL1 MXRA8 UBE2J2 LOC284600 LINC01342 HES4 CCNL2 MIR200B LOC100130417 TTLL10-AS1 ANKRD65 LOC148413 NOC2L LOC100288175 C1orf159 PLEKHN1 MIR6808 AGRN KLHL17 FAM132A MIR429 MRPL20 ISG15 SDF4 AURKAIP1 LOC107985728 TTLL10 SAMD11 LOC105378948 TNFRSF4 TAS1R3 PERM1 CPTP MIR6727 ACAP3 DVL1
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss SAMD11 NOC2L PLEKHN1 LOC284600 AGRN KLHL17 HES4 PERM1 LOC100130417 ISG15 LOC107985728
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion RNF223 NOC2L LOC100288175 TNFRSF18 C1orf159 PLEKHN1 MIR200A AGRN KLHL17 MIR429 ISG15 SDF4 TTLL10 SAMD11 LOC105378948 TNFRSF4 LINC01342 HES4 PERM1 MIR200B TTLL10-AS1
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain FAM41C SAMD11 LINC01128 NOC2L PLEKHN1 LOC284600 KLHL17 HES4 PERM1 LOC100130417 LOC107985728

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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