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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147196728 on build GRCh38
Cytoband
1q21.1
Assay ID Hs03337997_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 NP_001138302.1
NM_001461.3 NP_001452.2
XM_005272946.4 XP_005273003.1
XM_005272947.4 XP_005273004.1
XM_005272948.4 XP_005273005.1
XM_006711245.3 XP_006711308.1
XM_011509350.2 XP_011507652.1
XM_011509351.2 XP_011507653.1
XM_017000801.1 XP_016856290.1
XM_017000802.1 XP_016856291.1
AK222728.1 BAD96448.1
AK225739.1
AK314647.1
BC035687.1 AAH35687.1
L37080.1 AAA67849.1
Z47553.1 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss LOC101928979 GJA5 PEX11B NBPF10 HYDIN2 RNVU1-3 LOC100996763 LOC100996517 NBPF13P PRKAB2 LIX1L NBPF12 RNF115 RNVU1-6 LOC105371226 POLR3GL NBPF11 LOC284561 LOC100132057 NUDT4P2 RBM8A CD160 ANKRD35 NBPF14 PIAS3 MIR5087 LOC105371242 LINC01138 CH17-408M7.1 RNU1-13P ACP6 PDIA3P1 TXNIP RNVU1-7 MIR6077 CHD1L RNVU1-8 MIR6736 GPR89B HFE2 LINC00624 LOC100505824 ANKRD34A FMO5 NOTCH2NL PDZK1 ITGA10 LOC101927468 POLR3C NUDT4P1 RNVU1-1 PDZK1P1 PPIAL4G NUDT17 GJA8 GNRHR2 LOC728989 GPR89A BCL9 PDE4DIP
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain LOC101928979 GJA5 CHD1L NBPF10 HYDIN2 RNVU1-3 LOC100996763 RNVU1-8 GPR89B LINC00624 LOC100996517 NBPF13P LOC100505824 PRKAB2 NBPF12 FMO5 NOTCH2NL RNVU1-6 LOC105371226 NBPF11 LOC284561 LOC101927468 NUDT4P1 RNVU1-1 LOC100132057 PDZK1P1 NUDT4P2 NBPF14 MIR5087 PPIAL4G LOC105371242 GJA8 LINC01138 CH17-408M7.1 RNU1-13P LOC728989 ACP6 PDIA3P1 BCL9 PDE4DIP RNVU1-7 MIR6077
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss GJA5 CHD1L NBPF10 HYDIN2 RNVU1-3 LOC100996763 RNVU1-8 GPR89B LINC00624 LOC100996517 NBPF13P LOC100505824 PRKAB2 NBPF12 FMO5 NOTCH2NL LOC105371226 NBPF11 LOC284561 LOC101927468 NUDT4P1 RNVU1-1 LOC100132057 PDZK1P1 NUDT4P2 NBPF14 MIR5087 PPIAL4G LOC105371242 GJA8 LINC01138 CH17-408M7.1 RNU1-13P LOC728989 ACP6 PDIA3P1 BCL9 PDE4DIP RNVU1-7 MIR6077
nsv1077657 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion CHD1L NBPF13P PRKAB2 FMO5 LOC728989 PDIA3P1 RNVU1-8
dgv67e199 Chr.1:147188956 - 147198583 on Build GRCh38 Deletion CHD1L FMO5
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion LOC101928979 GJA5 CHD1L NBPF10 HYDIN2 RNVU1-3 LOC100996763 RNVU1-8 GPR89B HFE2 LINC00624 LOC100996517 NBPF13P LOC100505824 PRKAB2 LIX1L ANKRD34A NBPF12 FMO5 NOTCH2NL RNVU1-6 LOC105371226 POLR3GL NBPF11 LOC284561 LOC101927468 NUDT4P1 RNVU1-1 LOC100132057 PDZK1P1 NUDT4P2 NBPF14 MIR5087 PPIAL4G LOC105371242 GJA8 LINC01138 CH17-408M7.1 RNU1-13P LOC728989 ACP6 PDIA3P1 BCL9 PDE4DIP TXNIP RNVU1-7 MIR6077
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication GJA5 CHD1L HYDIN2 RNVU1-3 LOC100996763 RNVU1-8 GPR89B LINC00624 LOC100996517 NBPF13P LOC100505824 PRKAB2 NBPF12 FMO5 NOTCH2NL LOC105371226 NBPF11 LOC284561 LOC101927468 NUDT4P1 RNVU1-1 LOC100132057 PDZK1P1 NUDT4P2 NBPF14 MIR5087 PPIAL4G LOC105371242 GJA8 LINC01138 CH17-408M7.1 RNU1-13P LOC728989 ACP6 PDIA3P1 BCL9 PDE4DIP RNVU1-7 MIR6077
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain LOC101928979 GJA5 CHD1L NBPF10 HYDIN2 RNVU1-3 LOC100996763 RNVU1-8 GPR89B LINC00624 LOC100996517 NBPF13P LOC100505824 PRKAB2 NBPF12 FMO5 NOTCH2NL RNVU1-6 LOC105371226 NBPF11 LOC284561 LOC101927468 NUDT4P1 RNVU1-1 LOC100132057 PDZK1P1 NUDT4P2 NBPF14 MIR5087 PPIAL4G LOC105371242 GJA8 LINC01138 CH17-408M7.1 RNU1-13P LOC728989 ACP6 PDIA3P1 BCL9 PDE4DIP RNVU1-7 MIR6077
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion LOC101928979 GJA5 CHD1L NBPF10 HYDIN2 RNVU1-3 LOC100996763 RNVU1-8 GPR89B LINC00624 LOC100996517 NBPF13P NBPF9 LOC100505824 PRKAB2 NBPF12 FMO5 NOTCH2NL LOC105371226 NBPF11 LOC284561 LOC101927468 NUDT4P1 RNVU1-1 LOC100132057 PDZK1P1 NUDT4P2 NBPF14 MIR5087 PPIAL4G LOC105371242 GJA8 LINC01138 CH17-408M7.1 RNU1-13P LOC728989 ACP6 PDIA3P1 BCL9 PDE4DIP RNVU1-7 MIR6077
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss CHD1L PRKAB2 FMO5 PDIA3P1
esv3587435 Chr.1:147189056 - 147198713 on Build GRCh38 Loss CHD1L FMO5

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