Hs03342680_cn

• Gene Symbol: SLC35E2B
• Assay Reference Genome Location: Chr.1:1670853 on build GRCh38
• Cytoband: 1p36.33

Target Gene Details

• Entrez Gene ID: 728661
• Gene Name: solute carrier family 35 member E2B
• Gene Aliases: SLC35E2
• Location: Chr.1:1661478-1692804 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC35E2B	NM_001110781.2			NP_001104251.1
	NM_001290264.1			NP_001277193.1
	XM_011542072.1			XP_011540374.1
	AB007916.3
	AK125619.1
	AK307886.1
	BC110653.1			AAI10654.1
	CR936618.1			CAI56761.1
	DA794179.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n54	Chr.1:1663759 - 1696548 on Build GRCh38	Loss	SLC35E2B
dgv5n111	Chr.1:1575421 - 1823403 on Build GRCh38	Deletion	SLC35E2 CDK11B MMP23B FNDC10 NADK MIB2 MMP23A SLC35E2B GNB1 CDK11A
dgv8n100	Chr.1:1569349 - 1741152 on Build GRCh38	Loss	SLC35E2 SSU72 CDK11B MMP23B FNDC10 MIB2 MMP23A SLC35E2B CDK11A
esv3575582	Chr.1:1624086 - 1721336 on Build GRCh38	Gain	CDK11B MMP23B MIB2 MMP23A SLC35E2B CDK11A
esv3585010	Chr.1:1670280 - 1751138 on Build GRCh38	Loss	SLC35E2 MMP23A SLC35E2B CDK11A
nsv482937	Chr.1:10001 - 2368561 on Build GRCh38	Loss	LOC102725121 ATAD3A OR4F29 CCNL2 CPSF3L LOC100288175 CDK11B MIR200A LOC101928626 LOC105378947 LOC102724312 CALML6 WASH7P MMP23B MORN1 MIB2 LOC100288069 CDK11A CPTP HES4 MTND2P28 NOC2L FAM138A TMEM88B LOC100129534 LOC729737 LOC148413 MIR6723 NADK LOC107985729 MIR1302-2 MXRA8 MTND1P23 LOC105378949 LOC100287934 LOC100134822 TNFRSF4 SAMD11 TTLL10 RNF223 ANKRD65 ACAP3 ATAD3C LOC100506504 ISG15 LINC01128 PRKCZ PERM1 TTLL10-AS1 LOC100130417 SLC35E2 MIR6808 FNDC10 B3GALT6 TMEM240 LOC105378591 AURKAIP1 LINC00115 MIR200B MIR429 SKI GABRD LOC100132287 SLC35E2B LOC284600 MRPL20 LINC01342 LOC100133331 C1orf159 MIR6727 ATAD3B FAM41C AGRN GNB1 OR4F16 LOC107985728 PUSL1 PLEKHN1 LOC105378592 DVL1 TMEM52 VWA1 LOC105378589 CFAP74 MIR6726 LOC107984841 SDF4 KLHL17 TAS1R3 MMP23A TNFRSF18 FAM87B OR4F5 LOC105378948 SSU72 DDX11L1 FAM132A UBE2J2 MIR6859-2 SCNN1D FAAP20 MIR6859-1
nsv1160797	Chr.1:1566216 - 1805918 on Build GRCh38	Duplication	SLC35E2 SSU72 CDK11B MMP23B FNDC10 NADK MIB2 MMP23A SLC35E2B GNB1 CDK11A
dgv2e199	Chr.1:1653096 - 1721890 on Build GRCh38	Deletion	CDK11B MMP23A SLC35E2B CDK11A
esv2760410	Chr.1:1565561 - 1756248 on Build GRCh38	Gain+Loss	SLC35E2 SSU72 CDK11B MMP23B FNDC10 NADK MIB2 MMP23A SLC35E2B CDK11A
esv3585008	Chr.1:1663929 - 1681002 on Build GRCh38	Loss	SLC35E2B
esv3585007	Chr.1:1647187 - 1714507 on Build GRCh38	Loss	CDK11B MMP23A SLC35E2B CDK11A
nsv950516	Chr.1:1663141 - 1715961 on Build GRCh38	Deletion	MMP23A SLC35E2B CDK11A
esv27786	Chr.1:1632502 - 1752267 on Build GRCh38	Gain	SLC35E2 CDK11B MMP23B NADK MMP23A SLC35E2B CDK11A
nsv545022	Chr.1:1665581 - 1683909 on Build GRCh38	Loss	SLC35E2B
nsv10161	Chr.1:776731 - 1777210 on Build GRCh38	Gain+Loss	ATAD3A TTLL10-AS1 CCNL2 LOC100130417 CPSF3L SLC35E2 MIR6808 LOC100288175 CDK11B MIR200A FNDC10 B3GALT6 LOC102724312 TMEM240 AURKAIP1 LINC00115 MIR200B MMP23B MIR429 MIB2 LOC100288069 SLC35E2B CDK11A LOC284600 MRPL20 LINC01342 C1orf159 MIR6727 ATAD3B FAM41C CPTP HES4 AGRN NOC2L LOC107985728 TMEM88B PUSL1 PLEKHN1 LOC148413 DVL1 NADK VWA1 LOC107985729 MXRA8 LOC100287934 MIR6726 SDF4 TNFRSF4 SAMD11 TTLL10 RNF223 ANKRD65 KLHL17 TAS1R3 MMP23A TNFRSF18 FAM87B LOC105378948 ACAP3 ATAD3C SSU72 FAM132A UBE2J2 ISG15 SCNN1D LINC01128 PERM1
nsv545018	Chr.1:1638499 - 1688102 on Build GRCh38	Loss	CDK11B SLC35E2B
dgv3n67	Chr.1:1653920 - 1735718 on Build GRCh38	Gain	SLC35E2 CDK11B MMP23A SLC35E2B CDK11A
esv2758913	Chr.1:1389149 - 2092899 on Build GRCh38	Gain+Loss	TMEM88B ATAD3A LOC148413 NADK CCNL2 TMEM52 VWA1 LOC107985729 SLC35E2 LOC105378589 CDK11B LOC105378949 FNDC10 CFAP74 LOC102724312 TMEM240 LOC105378591 CALML6 MMP23B GABRD ANKRD65 MIB2 MMP23A SLC35E2B CDK11A ATAD3C SSU72 MRPL20 ATAD3B GNB1 PRKCZ

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

secondary carrier transporter