Hs03344690_cn

• Gene Symbol: RLF
• Assay Reference Genome Location: Chr.1:40167454 on build GRCh38
• Cytoband: 1p34.2

Target Gene Details

• Entrez Gene ID: 6018
• Gene Name: rearranged L-myc fusion
• Gene Aliases: ZN-15L, ZNF292L
• Location: Chr.1:40161369-40240921 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RLF	NM_012421.3			NP_036553.2
	XM_017002016.1			XP_016857505.1
	XM_017002017.1			XP_016857506.1
	XM_017002018.1			XP_016857507.1
	AK307662.1
	BC113666.1
	U22377.1			AAC50396.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2758933	Chr.1:39759471 - 40194760 on Build GRCh38	Loss	BMP8B MFSD2A TRIT1 PPIE RLF MYCL CAP1 LOC101929536 PPT1 OXCT2
nsv829660	Chr.1:40073032 - 40266408 on Build GRCh38	Gain+Loss	TMCO2 RLF ZMPSTE24 PPT1

More Information

Additional Information:

For this assay, SNP(s) [rs145789441] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
DNA integration
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
chromosome organization

Function(s)

DNA binding
protein binding
zinc ion binding