Hs03347450_cn

• Gene Symbol: FAAP20
• Assay Reference Genome Location: Chr.1:2208471 on build GRCh38
• Cytoband: 1p36.33

Target Gene Details

• Entrez Gene ID: 199990
• Gene Name: Fanconi anemia core complex associated protein 20
• Gene Aliases: C1orf86, FP7162
• Location: Chr.1:2184460-2212720 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAAP20	NM_001282670.1			NP_001269599.1
	AK126870.1			BAC86730.1

Target Gene Details

• Entrez Gene ID: 105378592
• Gene Name: uncharacterized LOC105378592
• Gene Aliases: -
• Location: Chr.1:2207597-2215193 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC105378592	XM_017003076.1			XP_016858565.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv482937	Chr.1:10001 - 2368561 on Build GRCh38	Loss	LOC107985728 ATAD3C LOC284600 GABRD ATAD3A OR4F29 PERM1 MIR1302-2 MIB2 TAS1R3 MIR6859-1 DDX11L1 UBE2J2 MIR6727 LOC100134822 NOC2L LOC107984841 MRPL20 MIR200B DVL1 WASH7P CDK11A LOC107985729 AURKAIP1 CALML6 LINC01128 MTND2P28 CFAP74 GNB1 B3GALT6 MIR6859-2 C1orf159 MIR6726 OR4F16 TTLL10 MMP23B KLHL17 MORN1 TNFRSF18 PLEKHN1 LOC105378949 CPSF3L MIR6723 SAMD11 LOC105378947 FAM132A LOC100288175 FAM138A OR4F5 LOC105378591 TMEM88B LOC102725121 LOC100288069 LOC148413 LOC105378592 MIR429 LINC01342 LOC100130417 MIR6808 FAAP20 LOC102724312 FAM41C SSU72 SLC35E2B ANKRD65 MXRA8 LOC100133331 LOC105378589 MTND1P23 CPTP PUSL1 FAM87B HES4 PRKCZ SLC35E2 LINC00115 TMEM240 TMEM52 SDF4 LOC101928626 MMP23A LOC100129534 TTLL10-AS1 SCNN1D LOC105378948 TNFRSF4 ISG15 CDK11B FNDC10 LOC729737 AGRN NADK LOC100506504 SKI ACAP3 CCNL2 ATAD3B MIR200A LOC100132287 VWA1 RNF223 LOC100287934
dgv49n54	Chr.1:2151050 - 2289783 on Build GRCh38	Loss	PRKCZ LOC100506504 SKI LOC105378592 FAAP20
nsv951530	Chr.1:2153662 - 2229961 on Build GRCh38	Deletion	PRKCZ LOC100506504 SKI LOC105378592 FAAP20
nsv470682	Chr.1:2188394 - 2378754 on Build GRCh38	Loss	LOC100129534 MORN1 SKI LOC105378592 FAAP20
nsv834557	Chr.1:2117631 - 2311104 on Build GRCh38	Loss	PRKCZ LOC100506504 SKI LOC105378592 FAAP20

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cellular response to DNA damage stimulus
translesion synthesis
interstrand cross-link repair

Function(s)

protein binding
polyubiquitin binding
ubiquitin binding
metal ion binding
K63-linked polyubiquitin binding