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See other TNFRSF4 CNV Assays ›
Gene Symbol
TNFRSF4
Assay Reference Genome
Location

Chr.1:1215613 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03347543_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7293

Gene Name:

 TNF receptor superfamily member 4

Gene Aliases:

 ACT35, CD134, IMD16, OX40, TXGP1L

Location:

 Chr.1:1211326-1216812 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFRSF4 XM_017002231.1 1 1200 XP_016857720.1
XM_017002232.1 1 1200 XP_016857721.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain HES4 NOC2L RNF223 TTLL10 AGRN LOC107985728 SDF4 MIR429 LINC01342 ISG15 PERM1 LOC100130417 MIR200B FAM41C LOC100288175 TNFRSF4 C1orf159 TTLL10-AS1 TNFRSF18 KLHL17 PLEKHN1 SAMD11 MIR200A LOC105378948 LOC284600
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TAS1R3 RNF223 TTLL10 AGRN CPTP SDF4 FAM132A UBE2J2 MIR429 LINC01342 B3GALT6 MIR200B LOC100288175 TNFRSF4 CPSF3L C1orf159 PUSL1 ACAP3 TTLL10-AS1 TNFRSF18 MIR200A MIR6726 LOC105378948 MIR6727 SCNN1D
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss HES4 CCNL2 NOC2L RNF223 LINC00115 FAM87B AURKAIP1 UBE2J2 MIB2 LINC01128 ISG15 PERM1 LOC100130417 B3GALT6 MIR200B FAM41C LOC100288069 LOC102724312 TNFRSF4 C1orf159 ACAP3 SLC35E2B TTLL10-AS1 KLHL17 PLEKHN1 VWA1 TMEM88B MIR6727 MIR6808 CDK11B TAS1R3 NADK TTLL10 ANKRD65 SLC35E2 AGRN LOC100287934 LOC107985728 CPTP FNDC10 MRPL20 ATAD3B SDF4 FAM132A LOC148413 MIR429 LINC01342 LOC107985729 MMP23A LOC100288175 CPSF3L PUSL1 ATAD3C DVL1 MMP23B TNFRSF18 ATAD3A MXRA8 TMEM240 SAMD11 MIR200A SSU72 MIR6726 CDK11A LOC105378948 LOC284600 SCNN1D
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss HES4 CCNL2 LOC105378589 LOC729737 FAM87B GNB1 UBE2J2 LINC01128 LOC105378947 ISG15 LOC107984841 LOC100130417 B3GALT6 TNFRSF4 SLC35E2B TTLL10-AS1 LOC101928626 PLEKHN1 PRKCZ TMEM88B TAS1R3 TTLL10 SLC35E2 AGRN LOC100287934 CPTP MRPL20 LOC100133331 MIR1302-2 LOC105378591 FAM132A WASH7P MIR429 LINC01342 LOC100132287 GABRD FAAP20 CPSF3L DVL1 MORN1 ATAD3A OR4F16 MXRA8 SAMD11 CDK11A LOC105378948 LOC284600 SCNN1D DDX11L1 NOC2L RNF223 LOC102725121 LINC00115 CFAP74 AURKAIP1 MIB2 OR4F5 PERM1 MIR6723 MIR200B FAM41C LOC100288069 LOC102724312 C1orf159 ACAP3 LOC105378949 KLHL17 VWA1 MTND2P28 MIR6727 LOC100129534 MIR6808 CDK11B TMEM52 NADK SKI ANKRD65 LOC105378592 LOC107985728 FNDC10 MIR6859-2 ATAD3B SDF4 LOC148413 LOC107985729 FAM138A MMP23A MTND1P23 LOC100288175 PUSL1 ATAD3C MMP23B TNFRSF18 LOC100134822 LOC100506504 CALML6 TMEM240 MIR200A SSU72 MIR6726 MIR6859-1 OR4F29
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss HES4 NOC2L RNF223 TTLL10 AGRN LINC00115 LOC107985728 FAM87B SDF4 FAM132A UBE2J2 LINC01128 MIR429 LINC01342 ISG15 PERM1 LOC100130417 B3GALT6 MIR200B FAM41C LOC100288175 TNFRSF4 C1orf159 TTLL10-AS1 TNFRSF18 KLHL17 PLEKHN1 SAMD11 MIR200A LOC105378948 LOC284600
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion CDK11B CCNL2 TAS1R3 TTLL10 ANKRD65 CPTP FNDC10 MRPL20 AURKAIP1 ATAD3B SDF4 FAM132A LOC148413 UBE2J2 MIB2 MIR429 LINC01342 LOC107985729 B3GALT6 MIR200B LOC102724312 TNFRSF4 CPSF3L C1orf159 PUSL1 ATAD3C DVL1 ACAP3 MMP23B TTLL10-AS1 TNFRSF18 ATAD3A MXRA8 TMEM240 MIR200A VWA1 SSU72 MIR6726 TMEM88B MIR6727 SCNN1D MIR6808
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain HES4 CCNL2 NOC2L TAS1R3 RNF223 TTLL10 ANKRD65 AGRN LOC107985728 CPTP MRPL20 AURKAIP1 SDF4 FAM132A LOC148413 UBE2J2 MIR429 LINC01342 ISG15 PERM1 LOC100130417 B3GALT6 MIR200B LOC100288175 TNFRSF4 CPSF3L C1orf159 PUSL1 DVL1 ACAP3 TTLL10-AS1 TNFRSF18 KLHL17 PLEKHN1 MXRA8 SAMD11 MIR200A MIR6726 TMEM88B LOC105378948 LOC284600 MIR6727 SCNN1D MIR6808
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion PERM1 HES4 NOC2L RNF223 MIR200B TTLL10 AGRN LOC100288175 TNFRSF4 C1orf159 TTLL10-AS1 TNFRSF18 KLHL17 PLEKHN1 SAMD11 MIR200A SDF4 LOC105378948 MIR429 LINC01342 ISG15
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain B3GALT6 RNF223 MIR200B TTLL10 TNFRSF4 C1orf159 TTLL10-AS1 TNFRSF18 MIR200A SDF4 FAM132A LOC105378948 UBE2J2 MIR429 LINC01342 SCNN1D
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss B3GALT6 RNF223 MIR200B TTLL10 TNFRSF4 C1orf159 ACAP3 TTLL10-AS1 TNFRSF18 MIR200A SDF4 MIR6726 FAM132A UBE2J2 MIR429 LINC01342 SCNN1D
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain B3GALT6 MIR200B TTLL10 TNFRSF4 CPSF3L PUSL1 ACAP3 TTLL10-AS1 TNFRSF18 MIR200A SDF4 MIR6726 FAM132A UBE2J2 MIR429 MIR6727 SCNN1D
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss TTLL10-AS1 TNFRSF18 B3GALT6 TTLL10 SDF4 TNFRSF4

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