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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147197189 on build GRCh38
Cytoband
1q21.1
Assay ID Hs03349098_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 NP_001138302.1
NM_001461.3 NP_001452.2
XM_005272946.4 XP_005273003.1
XM_005272947.4 XP_005273004.1
XM_005272948.4 XP_005273005.1
XM_006711245.3 XP_006711308.1
XM_011509350.2 XP_011507652.1
XM_011509351.2 XP_011507653.1
XM_017000801.1 XP_016856290.1
XM_017000802.1 XP_016856291.1
AK222728.1 BAD96448.1
AK225739.1
AK314647.1
BC035687.1 AAH35687.1
L37080.1 AAA67849.1
Z47553.1 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss NBPF12 ACP6 GJA5 RNVU1-6 GPR89B NBPF14 NBPF13P LOC101928979 CH17-408M7.1 HFE2 RNVU1-3 PIAS3 RNF115 HYDIN2 LOC105371242 RNVU1-1 NUDT17 PEX11B PPIAL4G NBPF10 ITGA10 GNRHR2 PDZK1P1 LOC100996517 RNVU1-7 RBM8A CHD1L GPR89A LINC00624 LOC100132057 NUDT4P1 ANKRD35 NUDT4P2 PDE4DIP LOC284561 ANKRD34A MIR5087 PDIA3P1 BCL9 LOC101927468 MIR6077 POLR3C CD160 LIX1L TXNIP PDZK1 PRKAB2 RNU1-13P POLR3GL NBPF11 LOC728989 NOTCH2NL LOC100505824 GJA8 MIR6736 LOC105371226 FMO5 LINC01138 LOC100996763 RNVU1-8
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain LOC100132057 NBPF12 ACP6 GJA5 RNVU1-6 NUDT4P1 NUDT4P2 PDE4DIP GPR89B NBPF14 NBPF13P LOC284561 MIR5087 LOC101928979 PDIA3P1 CH17-408M7.1 BCL9 RNVU1-3 LOC101927468 MIR6077 HYDIN2 LOC105371242 RNVU1-1 PRKAB2 PPIAL4G RNU1-13P NBPF11 NBPF10 LOC728989 PDZK1P1 LOC100996517 RNVU1-7 NOTCH2NL LOC100505824 GJA8 LOC105371226 FMO5 LINC01138 LOC100996763 CHD1L LINC00624 RNVU1-8
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss LOC100132057 NBPF12 ACP6 GJA5 NUDT4P1 NUDT4P2 PDE4DIP GPR89B NBPF14 NBPF13P LOC284561 MIR5087 PDIA3P1 CH17-408M7.1 BCL9 RNVU1-3 LOC101927468 MIR6077 HYDIN2 LOC105371242 RNVU1-1 PRKAB2 PPIAL4G RNU1-13P NBPF11 NBPF10 LOC728989 PDZK1P1 LOC100996517 RNVU1-7 NOTCH2NL LOC100505824 GJA8 LOC105371226 FMO5 LINC01138 LOC100996763 CHD1L LINC00624 RNVU1-8
nsv1077657 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion LOC728989 NBPF13P FMO5 PRKAB2 PDIA3P1 CHD1L RNVU1-8
dgv67e199 Chr.1:147188956 - 147198583 on Build GRCh38 Deletion FMO5 CHD1L
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion LOC100132057 NBPF12 ACP6 GJA5 RNVU1-6 NUDT4P1 NUDT4P2 PDE4DIP GPR89B NBPF14 NBPF13P LOC284561 ANKRD34A MIR5087 LOC101928979 PDIA3P1 CH17-408M7.1 HFE2 BCL9 RNVU1-3 LOC101927468 MIR6077 HYDIN2 LIX1L LOC105371242 RNVU1-1 TXNIP PRKAB2 PPIAL4G RNU1-13P POLR3GL NBPF11 NBPF10 LOC728989 PDZK1P1 LOC100996517 RNVU1-7 NOTCH2NL LOC100505824 GJA8 LOC105371226 FMO5 LINC01138 LOC100996763 CHD1L LINC00624 RNVU1-8
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication LOC100132057 NBPF12 ACP6 GJA5 NUDT4P1 NUDT4P2 PDE4DIP GPR89B NBPF14 NBPF13P LOC284561 MIR5087 PDIA3P1 CH17-408M7.1 BCL9 RNVU1-3 LOC101927468 MIR6077 HYDIN2 LOC105371242 RNVU1-1 PRKAB2 PPIAL4G RNU1-13P NBPF11 LOC728989 PDZK1P1 LOC100996517 RNVU1-7 NOTCH2NL LOC100505824 GJA8 LOC105371226 FMO5 LINC01138 LOC100996763 CHD1L LINC00624 RNVU1-8
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain LOC100132057 NBPF12 ACP6 GJA5 RNVU1-6 NUDT4P1 NUDT4P2 PDE4DIP GPR89B NBPF14 NBPF13P LOC284561 MIR5087 LOC101928979 PDIA3P1 CH17-408M7.1 BCL9 RNVU1-3 LOC101927468 MIR6077 HYDIN2 LOC105371242 RNVU1-1 PRKAB2 PPIAL4G RNU1-13P NBPF11 NBPF10 LOC728989 PDZK1P1 LOC100996517 RNVU1-7 NOTCH2NL LOC100505824 GJA8 LOC105371226 FMO5 LINC01138 LOC100996763 CHD1L LINC00624 RNVU1-8
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion LOC100132057 NBPF12 ACP6 GJA5 NUDT4P1 NUDT4P2 PDE4DIP GPR89B NBPF14 NBPF13P LOC284561 MIR5087 LOC101928979 PDIA3P1 CH17-408M7.1 BCL9 RNVU1-3 LOC101927468 MIR6077 HYDIN2 NBPF9 LOC105371242 RNVU1-1 PRKAB2 PPIAL4G RNU1-13P NBPF11 NBPF10 LOC728989 PDZK1P1 LOC100996517 RNVU1-7 NOTCH2NL LOC100505824 GJA8 LOC105371226 FMO5 LINC01138 LOC100996763 CHD1L LINC00624 RNVU1-8
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss FMO5 PRKAB2 PDIA3P1 CHD1L
esv3587435 Chr.1:147189056 - 147198713 on Build GRCh38 Loss FMO5 CHD1L

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