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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228364823 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03351923_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 XP_011542652.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Intron 95
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
XM_017002473.1 XP_016857962.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain GJC2 MIR5008 WNT3A SNAP47 PRSS38 HIST3H3 ARF1 LOC105373289 WNT9A MIR3620 IBA57 LOC100506571 LOC101060022 C1orf145 MIR6742 RNF187 IBA57-AS1 JMJD4 HIST3H2BB TRIM11 LOC107985355 C1orf35 LOC101927401 MRPL55 TRIM17 GUK1 OBSCN MIR4666A HIST3H2A
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain RNA5S9 RNA5S7 DUSP5P1 HIST3H3 RNA5S12 RNA5S17 RNA5S16 RNA5S15 RNA5S14 RNA5S8 RNA5S1 MIR6742 RNA5S11 RNA5S2 RNF187 HIST3H2BB LOC105373132 RNA5S6 TRIM11 RNA5S4 RNA5S5 RNA5S3 RHOU LOC101927401 TRIM17 RNA5S10 BTNL10 RNA5S13 OBSCN MIR4666A HIST3H2A
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss MIR6742 LOC101927401 RNF187 TRIM17 HIST3H2BB TRIM11 OBSCN HIST3H3 MIR4666A HIST3H2A
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain GJC2 RNA5S9 WNT3A RNA5S7 PRSS38 HIST3H3 ARF1 RNA5S12 LOC105373289 RNA5S17 MIR3620 RNA5S15 LOC100506571 LOC101060022 RNA5S14 RNA5S8 MIR6742 RNA5S11 RNF187 IBA57-AS1 JMJD4 LOC105373132 LOC101927401 TRIM17 RNA5S10 BTNL10 RNA5S13 MIR4666A HIST3H2A MIR5008 SNAP47 DUSP5P1 WNT9A RNA5S16 IBA57 C1orf145 RNA5S1 RNA5S2 HIST3H2BB RNA5S6 TRIM11 RNA5S4 LOC107985355 RNA5S5 C1orf35 RNA5S3 RHOU MRPL55 GUK1 OBSCN
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss MIR6742 GJC2 IBA57-AS1 HIST3H2BB TRIM11 HIST3H3 LOC101927401 TRIM17 IBA57 GUK1 OBSCN C1orf145 MIR4666A HIST3H2A
nsv549295 Chr.1:228276547 - 228413937 on Build GRCh38 Loss MIR6742 LOC101927401 TRIM17 TRIM11 OBSCN
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss GJC2 MIR5008 WNT3A HIST3H3 ARF1 WNT9A MIR3620 IBA57 LOC100506571 LOC101060022 C1orf145 MIR6742 RNF187 IBA57-AS1 HIST3H2BB TRIM11 LOC107985355 C1orf35 LOC101927401 MRPL55 TRIM17 GUK1 OBSCN MIR4666A HIST3H2A
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion MIR6742 LOC101927401 TRIM17 TRIM11 OBSCN HIST3H3
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion LOC101927401 OBSCN

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