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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228365986 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03352042_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
Your Price
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441.65
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 XP_011542652.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Intron 98
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain HIST3H2BB IBA57-AS1 C1orf35 PRSS38 MIR4666A LOC107985355 ARF1 GJC2 TRIM17 IBA57 LOC101060022 WNT9A MIR5008 C1orf145 MIR3620 MIR6742 GUK1 LOC101927401 HIST3H3 LOC105373289 TRIM11 RNF187 OBSCN HIST3H2A SNAP47 MRPL55 WNT3A JMJD4 LOC100506571
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain RNA5S17 HIST3H2BB RNA5S1 MIR4666A DUSP5P1 RNA5S10 TRIM17 RNA5S7 LOC105373132 MIR6742 LOC101927401 RNA5S12 RHOU HIST3H3 TRIM11 RNA5S15 RNA5S14 RNA5S3 RNF187 RNA5S16 OBSCN RNA5S11 RNA5S8 RNA5S5 RNA5S6 HIST3H2A RNA5S2 BTNL10 RNA5S4 RNA5S9 RNA5S13
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss LOC101927401 HIST3H3 HIST3H2A HIST3H2BB TRIM11 RNF187 OBSCN MIR4666A MIR6742 TRIM17
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain RNA5S17 IBA57-AS1 RNA5S1 LOC107985355 ARF1 RNA5S10 TRIM17 LOC101060022 RNA5S7 WNT9A LOC101927401 HIST3H3 LOC105373289 TRIM11 RNA5S14 RNF187 RNA5S8 SNAP47 BTNL10 RNA5S4 HIST3H2BB C1orf35 PRSS38 MIR4666A DUSP5P1 GJC2 IBA57 MIR5008 C1orf145 MIR3620 LOC105373132 MIR6742 GUK1 RNA5S12 RHOU RNA5S15 RNA5S3 RNA5S16 OBSCN RNA5S11 RNA5S5 RNA5S6 HIST3H2A RNA5S2 RNA5S9 MRPL55 RNA5S13 WNT3A JMJD4 LOC100506571
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss LOC101927401 HIST3H3 HIST3H2BB TRIM11 IBA57-AS1 OBSCN MIR4666A GJC2 TRIM17 IBA57 HIST3H2A C1orf145 MIR6742 GUK1
nsv549295 Chr.1:228276547 - 228413937 on Build GRCh38 Loss LOC101927401 TRIM11 OBSCN MIR6742 TRIM17
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss HIST3H2BB IBA57-AS1 C1orf35 MIR4666A LOC107985355 ARF1 GJC2 TRIM17 IBA57 LOC101060022 WNT9A MIR5008 C1orf145 MIR3620 MIR6742 GUK1 LOC101927401 HIST3H3 TRIM11 RNF187 OBSCN HIST3H2A MRPL55 WNT3A LOC100506571
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion LOC101927401 HIST3H3 TRIM11 OBSCN MIR6742 TRIM17
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion LOC101927401 OBSCN

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