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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228365986 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03352042_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 XP_011542652.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Intron 98
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain MIR6742 HIST3H2BB MIR5008 TRIM11 GUK1 LOC101060022 C1orf35 LOC105373289 MIR4666A HIST3H3 TRIM17 LOC107985355 JMJD4 C1orf145 MRPL55 RNF187 ARF1 GJC2 IBA57-AS1 WNT3A HIST3H2A OBSCN MIR3620 PRSS38 LOC101927401 IBA57 LOC100506571 WNT9A SNAP47
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain TRIM11 RNA5S9 RNA5S13 LOC105373289 RNA5S2 BTNL10 HIST3H3 LOC107985355 C1orf145 MRPL55 RNF187 RNA5S10 ARF1 IBA57-AS1 RNA5S14 WNT3A LOC105373132 OBSCN RNA5S16 MIR3620 LOC101927401 IBA57 LOC100506571 RNA5S6 WNT9A RNA5S1 MIR6742 HIST3H2BB MIR5008 RNA5S3 GUK1 DUSP5P1 LOC101060022 RNA5S5 C1orf35 RNA5S12 RNA5S17 RNA5S4 MIR4666A TRIM17 RNA5S11 JMJD4 RNA5S8 RHOU RNA5S15 GJC2 HIST3H2A PRSS38 RNA5S7 SNAP47
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss HIST3H3 TRIM17 MIR6742 HIST3H2BB RNF187 LOC101927401 TRIM11 HIST3H2A OBSCN MIR4666A
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain MIR6742 HIST3H2BB RNA5S3 TRIM11 RNA5S9 RNA5S13 DUSP5P1 RNA5S5 RNA5S12 RNA5S17 RNA5S2 RNA5S4 BTNL10 MIR4666A HIST3H3 TRIM17 RNA5S11 RNA5S8 RHOU RNF187 RNA5S10 RNA5S15 RNA5S14 LOC105373132 HIST3H2A OBSCN RNA5S16 LOC101927401 RNA5S6 RNA5S7 RNA5S1
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss HIST3H3 TRIM17 C1orf145 MIR6742 HIST3H2BB GJC2 IBA57-AS1 TRIM11 HIST3H2A OBSCN GUK1 LOC101927401 IBA57 MIR4666A
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss MIR6742 HIST3H2BB MIR5008 TRIM11 GUK1 LOC101060022 C1orf35 MIR4666A HIST3H3 TRIM17 LOC107985355 C1orf145 MRPL55 RNF187 ARF1 GJC2 IBA57-AS1 WNT3A HIST3H2A OBSCN MIR3620 LOC101927401 IBA57 LOC100506571 WNT9A
dgv840n54 Chr.1:228276547 - 228369087 on Build GRCh38 Loss LOC101927401 OBSCN
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion HIST3H3 TRIM17 MIR6742 LOC101927401 TRIM11 OBSCN
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion LOC101927401 OBSCN

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