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See other RNF223 CNV Assays ›
Gene Symbol
RNF223
Assay Reference Genome
Location

Chr.1:1066857 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03352536_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 401934

Gene Name:

 ring finger protein 223

Gene Aliases:

 -

Location:

 Chr.1:1065635-1074307 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RNF223 XM_017001286.1 XP_016856775.1
XM_017001287.1 XP_016856776.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv945741 Chr.1:1007194 - 1092619 on Build GRCh38 Duplication RNF223 LOC105378948 C1orf159 LOC100288175 AGRN ISG15
nsv509146 Chr.1:1010510 - 1111188 on Build GRCh38 Insertion RNF223 LOC105378948 C1orf159 LOC100288175 AGRN ISG15
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC107985728 RNF223 SAMD11 LOC105378948 C1orf159 AGRN PERM1 PLEKHN1 HES4 LOC100130417 KLHL17 NOC2L LOC100288175 LOC284600 ISG15
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC100132287 UBE2J2 LOC148413 CPSF3L LOC100287934 LOC100134822 SKI DVL1 ACAP3 MIR6723 OR4F16 MIR6726 CDK11B SAMD11 FAM138A LOC105378589 AURKAIP1 PLEKHN1 CCNL2 KLHL17 MIR1302-2 SLC35E2 DDX11L1 NADK LOC284600 MTND2P28 LOC105378947 VWA1 ANKRD65 RNF223 FAAP20 MIR200A SLC35E2B LOC100288069 LOC101928626 MMP23B OR4F5 LOC100130417 MIR6859-2 LOC100288175 PRKCZ LOC102725121 MIR200B MIR429 WASH7P C1orf159 MIR6727 LOC105378949 MIR6808 FAM41C ISG15 ATAD3B TMEM52 GNB1 LOC105378948 LOC100133331 HES4 FAM87B CFAP74 MIB2 LOC107985728 ATAD3A MXRA8 GABRD PERM1 TNFRSF4 CDK11A MMP23A MORN1 TTLL10 FAM132A TTLL10-AS1 MIR6859-1 LOC100129534 NOC2L CALML6 LOC100506504 SSU72 SDF4 CPTP LINC01342 OR4F29 TAS1R3 PUSL1 LOC107984841 TNFRSF18 TMEM240 LOC102724312 LOC107985729 B3GALT6 FNDC10 MRPL20 MTND1P23 SCNN1D LINC01128 AGRN LOC105378591 LOC729737 TMEM88B LINC00115 ATAD3C LOC105378592
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC107985728 RNF223 SAMD11 LOC105378948 C1orf159 AGRN PERM1 PLEKHN1 HES4 LOC100130417 KLHL17 NOC2L LOC100288175 LOC284600 ISG15
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain RNF223 MIR200A LOC105378948 LINC01342 TNFRSF18 HES4 LOC100130417 LOC100288175 MIR200B MIR429 LOC107985728 SAMD11 C1orf159 AGRN PERM1 TNFRSF4 PLEKHN1 TTLL10 TTLL10-AS1 KLHL17 NOC2L FAM41C LOC284600 ISG15 SDF4
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication CPTP RNF223 MIR200A UBE2J2 LOC105378948 LINC01342 CPSF3L TAS1R3 PUSL1 TNFRSF18 ACAP3 LOC100288175 B3GALT6 MIR6726 MIR200B MIR429 SCNN1D C1orf159 AGRN TNFRSF4 MIR6727 TTLL10 FAM132A TTLL10-AS1 SDF4
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain RNF223 LOC100288069 LOC105378948 LOC100133331 LOC101928626 LOC107984841 LOC100287934 HES4 LOC100130417 MIR6723 FAM87B LOC100288175 OR4F16 MTND1P23 LOC107985728 SAMD11 C1orf159 LINC01128 AGRN PERM1 PLEKHN1 KLHL17 NOC2L LINC00115 FAM41C LOC284600 MTND2P28 ISG15 LOC105378947
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss UBE2J2 LOC148413 LOC105378948 CPSF3L LOC100287934 HES4 DVL1 ACAP3 FAM87B MIR6726 MIB2 LOC107985728 CDK11B SAMD11 ATAD3A MXRA8 AURKAIP1 PERM1 TNFRSF4 PLEKHN1 CDK11A MMP23A TTLL10 CCNL2 FAM132A TTLL10-AS1 KLHL17 SLC35E2 NOC2L NADK LOC284600 SSU72 SDF4 VWA1 ANKRD65 CPTP RNF223 MIR200A SLC35E2B LOC100288069 LINC01342 TAS1R3 PUSL1 MMP23B TNFRSF18 LOC100130417 TMEM240 LOC102724312 LOC100288175 LOC107985729 B3GALT6 MIR200B MIR429 FNDC10 MRPL20 SCNN1D C1orf159 LINC01128 AGRN MIR6727 MIR6808 TMEM88B LINC00115 ATAD3C FAM41C ISG15 ATAD3B
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss RNF223 MIR200A UBE2J2 LOC105378948 LINC01342 TNFRSF18 HES4 LOC100130417 FAM87B LOC100288175 B3GALT6 MIR200B MIR429 LOC107985728 SAMD11 C1orf159 LINC01128 AGRN PERM1 TNFRSF4 PLEKHN1 TTLL10 FAM132A TTLL10-AS1 KLHL17 NOC2L LINC00115 FAM41C LOC284600 ISG15 SDF4
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain RNF223 SAMD11 LOC105378948 C1orf159 LINC01342 AGRN PERM1 PLEKHN1 HES4 KLHL17 NOC2L LOC100288175 ISG15
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain ANKRD65 CPTP RNF223 MIR200A UBE2J2 LOC148413 LOC105378948 LINC01342 CPSF3L TAS1R3 PUSL1 TNFRSF18 HES4 LOC100130417 DVL1 ACAP3 LOC100288175 B3GALT6 MIR6726 MIR200B MIR429 MRPL20 LOC107985728 SAMD11 SCNN1D MXRA8 C1orf159 AGRN AURKAIP1 PERM1 TNFRSF4 PLEKHN1 MIR6727 TTLL10 CCNL2 FAM132A TTLL10-AS1 MIR6808 KLHL17 NOC2L TMEM88B LOC284600 ISG15 SDF4
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion MIR200B MIR429 RNF223 MIR200A SAMD11 LOC105378948 C1orf159 LINC01342 AGRN TNFRSF18 PERM1 TNFRSF4 PLEKHN1 HES4 TTLL10 TTLL10-AS1 KLHL17 NOC2L LOC100288175 ISG15 SDF4

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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