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See other TNFRSF4 CNV Assays ›
Gene Symbol
TNFRSF4
Assay Reference Genome
Location

Chr.1:1214430 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03354605_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7293

Gene Name:

 TNF receptor superfamily member 4

Gene Aliases:

 ACT35, CD134, IMD16, OX40, TXGP1L

Location:

 Chr.1:1211326-1216812 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFRSF4 XM_011542075.2 1 206 XP_011540377.1
XM_017002231.1 XP_016857720.1
XM_017002232.1 XP_016857721.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain NOC2L FAM41C HES4 MIR429 TTLL10-AS1 LOC107985728 KLHL17 ISG15 SDF4 PERM1 LOC100130417 TNFRSF4 RNF223 LINC01342 MIR200B LOC100288175 MIR200A TNFRSF18 PLEKHN1 TTLL10 LOC284600 C1orf159 AGRN SAMD11 LOC105378948
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication B3GALT6 MIR429 PUSL1 SCNN1D ACAP3 TTLL10-AS1 MIR6726 FAM132A UBE2J2 SDF4 TNFRSF4 TAS1R3 RNF223 MIR6727 LINC01342 CPTP MIR200B LOC100288175 CPSF3L MIR200A TNFRSF18 TTLL10 C1orf159 AGRN LOC105378948
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss B3GALT6 LOC148413 FAM41C TMEM88B MIR429 ATAD3B TTLL10-AS1 LOC107985728 SLC35E2B KLHL17 FAM132A MIR6808 CDK11A UBE2J2 LOC100288069 LOC100287934 SDF4 LOC100130417 NADK TNFRSF4 LINC01342 LINC00115 DVL1 MIR200B LOC107985729 SSU72 LOC100288175 CPSF3L TNFRSF18 MRPL20 C1orf159 SAMD11 LOC105378948 MMP23B NOC2L MXRA8 HES4 TMEM240 PUSL1 ATAD3C SCNN1D ACAP3 MIR6726 ISG15 ATAD3A ANKRD65 FNDC10 AURKAIP1 PERM1 CDK11B MIB2 TAS1R3 FAM87B RNF223 MIR6727 SLC35E2 CPTP LINC01128 LOC102724312 MIR200A CCNL2 VWA1 PLEKHN1 MMP23A TTLL10 LOC284600 AGRN
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MORN1 B3GALT6 LOC148413 FAM41C TMEM88B MIR6859-1 TTLL10-AS1 KLHL17 MIR6808 CDK11A SKI UBE2J2 LOC100288069 LOC100287934 LOC100130417 TNFRSF4 LINC01342 LINC00115 FAM138A DVL1 MIR200B WASH7P LOC107985729 SSU72 LOC100288175 MIR6723 MIR1302-2 MRPL20 SAMD11 LOC105378948 MMP23B NOC2L CFAP74 LOC105378591 ATAD3A LOC105378949 FNDC10 CDK11B MIB2 PRKCZ LOC729737 TAS1R3 LOC100129534 FAM87B MIR6727 SLC35E2 LOC100506504 CPTP LINC01128 MIR200A CCNL2 PLEKHN1 MMP23A TTLL10 OR4F16 LOC102725121 MIR6859-2 MIR429 MTND1P23 ATAD3B LOC107985728 SLC35E2B FAM132A LOC101928626 SDF4 CALML6 NADK DDX11L1 OR4F29 GNB1 FAAP20 TMEM52 LOC100133331 LOC107984841 OR4F5 CPSF3L TNFRSF18 MTND2P28 C1orf159 MXRA8 LOC100132287 HES4 TMEM240 PUSL1 ATAD3C SCNN1D ACAP3 MIR6726 LOC105378947 ISG15 ANKRD65 AURKAIP1 PERM1 LOC100134822 GABRD LOC105378589 RNF223 LOC102724312 LOC105378592 VWA1 LOC284600 AGRN
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss NOC2L B3GALT6 FAM41C HES4 MIR429 TTLL10-AS1 LOC107985728 KLHL17 FAM132A ISG15 UBE2J2 SDF4 PERM1 LOC100130417 TNFRSF4 FAM87B RNF223 LINC01342 LINC00115 MIR200B LINC01128 LOC100288175 MIR200A TNFRSF18 PLEKHN1 TTLL10 LOC284600 C1orf159 AGRN SAMD11 LOC105378948
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MMP23B MXRA8 B3GALT6 LOC148413 TMEM88B MIR429 TMEM240 PUSL1 ATAD3C SCNN1D ATAD3B ACAP3 TTLL10-AS1 MIR6726 FAM132A MIR6808 ATAD3A UBE2J2 SDF4 ANKRD65 FNDC10 AURKAIP1 CDK11B TNFRSF4 MIB2 TAS1R3 MIR6727 LINC01342 DVL1 CPTP MIR200B LOC107985729 LOC102724312 SSU72 CPSF3L MIR200A TNFRSF18 CCNL2 VWA1 MRPL20 TTLL10 C1orf159
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain NOC2L MXRA8 B3GALT6 LOC148413 TMEM88B HES4 MIR429 PUSL1 SCNN1D ACAP3 TTLL10-AS1 MIR6726 LOC107985728 KLHL17 FAM132A MIR6808 ISG15 UBE2J2 SDF4 ANKRD65 AURKAIP1 PERM1 LOC100130417 TNFRSF4 TAS1R3 RNF223 MIR6727 LINC01342 DVL1 CPTP MIR200B LOC100288175 CPSF3L MIR200A TNFRSF18 CCNL2 PLEKHN1 MRPL20 TTLL10 LOC284600 C1orf159 AGRN SAMD11 LOC105378948
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion NOC2L HES4 RNF223 MIR429 LINC01342 TTLL10-AS1 MIR200B KLHL17 LOC100288175 MIR200A TNFRSF18 ISG15 PLEKHN1 SDF4 PERM1 TTLL10 C1orf159 AGRN TNFRSF4 SAMD11 LOC105378948
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain B3GALT6 RNF223 MIR429 LINC01342 SCNN1D TTLL10-AS1 MIR200B FAM132A MIR200A TNFRSF18 UBE2J2 SDF4 TTLL10 C1orf159 TNFRSF4 LOC105378948
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss B3GALT6 RNF223 MIR429 LINC01342 SCNN1D ACAP3 TTLL10-AS1 MIR6726 MIR200B FAM132A MIR200A TNFRSF18 UBE2J2 SDF4 TTLL10 C1orf159 TNFRSF4
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain B3GALT6 MIR429 MIR6727 PUSL1 SCNN1D ACAP3 TTLL10-AS1 MIR6726 MIR200B FAM132A CPSF3L MIR200A TNFRSF18 UBE2J2 SDF4 TTLL10 TNFRSF4
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss B3GALT6 TNFRSF18 SDF4 TTLL10 TTLL10-AS1 TNFRSF4

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