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See other PLEKHN1 CNV Assays ›
Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:966127 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03355250_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 XM_006710944.3 1 308 XP_006711007.2
XM_011542248.2 1 308 XP_011540550.2
XM_017002474.1 1 308 XP_016857963.1
XM_017002475.1 1 308 XP_016857964.1
XM_017002476.1 1 308 XP_016857965.1
XM_017002477.1 1 308 XP_016857966.1
XM_017002478.1 1 308 XP_016857967.1
XM_017002479.1 1 308 XP_016857968.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC100288175 PERM1 KLHL17 C1orf159 ISG15 PLEKHN1 LOC107985728 NOC2L HES4 LOC284600 LOC100130417 LOC105378948 AGRN RNF223 SAMD11
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss CDK11A CFAP74 FAM87B UBE2J2 PLEKHN1 MIR1302-2 CPTP ATAD3B LOC100288175 MTND2P28 SKI CPSF3L LOC107984841 MORN1 LOC100287934 OR4F29 LOC100506504 LOC107985728 HES4 LOC100288069 SAMD11 CALML6 PERM1 LOC100133331 SSU72 FNDC10 TAS1R3 MIR6859-2 TTLL10 MMP23B LOC102724312 LOC100129534 TNFRSF4 OR4F16 SLC35E2 NOC2L FAM41C LOC101928626 MXRA8 LOC100132287 PRKCZ LOC100134822 OR4F5 LOC148413 TMEM52 C1orf159 MIR200A TNFRSF18 SLC35E2B MRPL20 FAAP20 TMEM88B LOC102725121 LINC01128 MIB2 LOC105378948 LOC107985729 ANKRD65 NADK MIR200B CCNL2 MIR6859-1 FAM138A FAM132A ISG15 ATAD3A MTND1P23 PUSL1 TTLL10-AS1 LOC729737 LOC105378589 DVL1 VWA1 SDF4 GABRD LOC105378592 LOC105378949 LINC00115 MMP23A MIR6808 LOC105378947 LINC01342 SCNN1D MIR6727 B3GALT6 KLHL17 MIR6726 WASH7P CDK11B MIR429 TMEM240 ACAP3 MIR6723 LOC105378591 DDX11L1 AURKAIP1 ATAD3C LOC284600 LOC100130417 GNB1 AGRN RNF223
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC100288175 PERM1 KLHL17 C1orf159 ISG15 PLEKHN1 LOC107985728 NOC2L HES4 LOC284600 LOC100130417 LOC105378948 AGRN RNF223 SAMD11
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion PLEKHN1 LOC107985728 PERM1 KLHL17 NOC2L LOC284600 LOC100130417 SAMD11
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain PERM1 SDF4 C1orf159 MIR200A TNFRSF18 PLEKHN1 TTLL10 LOC105378948 LINC01342 LOC100288175 MIR200B KLHL17 ISG15 TNFRSF4 MIR429 LOC107985728 NOC2L FAM41C HES4 TTLL10-AS1 LOC284600 LOC100130417 AGRN RNF223 SAMD11
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain PERM1 LOC100133331 C1orf159 FAM87B LINC00115 PLEKHN1 LOC105378947 LINC01128 LOC105378948 LOC100288175 MTND2P28 KLHL17 LOC107984841 LOC100287934 ISG15 MIR6723 LOC107985728 MTND1P23 OR4F16 NOC2L FAM41C HES4 LOC101928626 LOC284600 LOC100130417 AGRN LOC100288069 RNF223 SAMD11
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC148413 CDK11A C1orf159 MIR200A FAM87B TNFRSF18 UBE2J2 PLEKHN1 SLC35E2B MRPL20 TMEM88B CPTP LINC01128 ATAD3B MIB2 LOC105378948 LOC107985729 ANKRD65 LOC100288175 NADK MIR200B CCNL2 CPSF3L FAM132A LOC100287934 ISG15 ATAD3A LOC107985728 HES4 PUSL1 TTLL10-AS1 LOC100288069 SAMD11 DVL1 VWA1 PERM1 SSU72 SDF4 LINC00115 FNDC10 MMP23A MIR6808 TAS1R3 TTLL10 LINC01342 SCNN1D MIR6727 MMP23B B3GALT6 KLHL17 MIR6726 LOC102724312 CDK11B TNFRSF4 MIR429 TMEM240 ACAP3 AURKAIP1 SLC35E2 NOC2L FAM41C ATAD3C MXRA8 LOC284600 LOC100130417 AGRN RNF223
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss PERM1 SDF4 C1orf159 MIR200A FAM87B TNFRSF18 LINC00115 UBE2J2 PLEKHN1 LINC01128 TTLL10 LOC105378948 LINC01342 LOC100288175 MIR200B B3GALT6 KLHL17 FAM132A ISG15 TNFRSF4 MIR429 LOC107985728 NOC2L FAM41C HES4 TTLL10-AS1 LOC284600 LOC100130417 AGRN RNF223 SAMD11
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain LOC100288175 PERM1 KLHL17 C1orf159 ISG15 PLEKHN1 NOC2L HES4 LOC105378948 AGRN LINC01342 RNF223 SAMD11
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain DVL1 LOC148413 PERM1 SDF4 C1orf159 MIR200A TNFRSF18 UBE2J2 PLEKHN1 MIR6808 MRPL20 TMEM88B TAS1R3 CPTP TTLL10 LOC105378948 LINC01342 ANKRD65 SCNN1D LOC100288175 MIR200B MIR6727 CCNL2 B3GALT6 CPSF3L KLHL17 MIR6726 FAM132A ISG15 TNFRSF4 MIR429 ACAP3 LOC107985728 AURKAIP1 NOC2L HES4 PUSL1 TTLL10-AS1 MXRA8 LOC284600 LOC100130417 AGRN RNF223 SAMD11
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss PLEKHN1 LOC107985728 PERM1 KLHL17 NOC2L HES4 LOC284600 LOC100130417 ISG15 AGRN SAMD11
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion LOC100288175 MIR200B PERM1 KLHL17 SDF4 C1orf159 MIR200A ISG15 TNFRSF4 TNFRSF18 MIR429 PLEKHN1 NOC2L HES4 TTLL10-AS1 TTLL10 LOC105378948 AGRN LINC01342 RNF223 SAMD11
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain PLEKHN1 LOC107985728 PERM1 KLHL17 NOC2L FAM41C HES4 LINC01128 LOC284600 LOC100130417 SAMD11

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


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