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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228363258 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03357721_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 XP_011542652.1
XM_011544351.2 1 195 XP_011542653.1
XM_011544352.2 1 195 XP_011542654.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Intron 95
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
XM_017002473.1 XP_016857962.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain HIST3H2BB MIR4666A WNT9A HIST3H3 LOC100506571 LOC101927401 HIST3H2A MIR5008 TRIM11 RNF187 IBA57-AS1 GUK1 WNT3A MIR6742 C1orf145 MRPL55 MIR3620 LOC101060022 OBSCN JMJD4 TRIM17 C1orf35 LOC105373289 GJC2 PRSS38 SNAP47 ARF1 IBA57 LOC107985355
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain RNA5S8 HIST3H2BB RNA5S12 RNA5S10 RNA5S5 MIR4666A RNA5S3 RNA5S4 HIST3H3 RNA5S13 LOC105373132 LOC101927401 HIST3H2A TRIM11 RNF187 RNA5S14 BTNL10 RNA5S9 MIR6742 RNA5S17 RNA5S6 OBSCN RNA5S7 TRIM17 RNA5S1 RNA5S16 RHOU RNA5S11 DUSP5P1 RNA5S2 RNA5S15
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain RNA5S8 HIST3H2BB RNA5S12 MIR4666A RNA5S3 HIST3H3 RNA5S13 LOC100506571 LOC105373132 LOC101927401 HIST3H2A TRIM11 IBA57-AS1 GUK1 WNT3A BTNL10 C1orf145 MIR3620 LOC101060022 OBSCN RNA5S7 JMJD4 RNA5S1 C1orf35 RNA5S16 GJC2 SNAP47 ARF1 LOC107985355 RNA5S10 RNA5S5 WNT9A RNA5S4 MIR5008 RNF187 RNA5S14 RNA5S9 MIR6742 RNA5S17 MRPL55 RNA5S6 TRIM17 LOC105373289 RHOU PRSS38 RNA5S11 IBA57 DUSP5P1 RNA5S2 RNA5S15
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss HIST3H2BB MIR4666A OBSCN HIST3H3 MIR6742 TRIM17 LOC101927401 HIST3H2A TRIM11 RNF187
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss HIST3H2BB MIR4666A OBSCN HIST3H3 TRIM17 LOC101927401 HIST3H2A GJC2 TRIM11 IBA57-AS1 GUK1 IBA57 MIR6742 C1orf145
dgv840n54 Chr.1:228276547 - 228369087 on Build GRCh38 Loss OBSCN LOC101927401
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss HIST3H2BB MIR4666A WNT9A HIST3H3 LOC100506571 LOC101927401 HIST3H2A MIR5008 TRIM11 RNF187 IBA57-AS1 GUK1 WNT3A MIR6742 C1orf145 MRPL55 MIR3620 LOC101060022 OBSCN TRIM17 C1orf35 GJC2 ARF1 IBA57 LOC107985355
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion OBSCN HIST3H3 MIR6742 TRIM17 LOC101927401 TRIM11
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion OBSCN LOC101927401

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