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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228363258 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03357721_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
Your Price
Online offer: 441.65
441.65
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 XP_011542652.1
XM_011544351.2 1 195 XP_011542653.1
XM_011544352.2 1 195 XP_011542654.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Intron 95
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
XM_017002473.1 XP_016857962.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain LOC101927401 HIST3H2A TRIM11 WNT9A LOC101060022 LOC107985355 IBA57 WNT3A GJC2 JMJD4 C1orf35 OBSCN TRIM17 SNAP47 LOC100506571 IBA57-AS1 PRSS38 MIR5008 HIST3H2BB MRPL55 LOC105373289 MIR4666A HIST3H3 MIR6742 RNF187 ARF1 GUK1 MIR3620 C1orf145
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss LOC101927401 MIR4666A HIST3H2A TRIM11 HIST3H3 MIR6742 RNF187 OBSCN TRIM17 HIST3H2BB
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain HIST3H2A TRIM11 BTNL10 WNT9A WNT3A RNA5S15 RNA5S12 LOC105373132 RNA5S9 OBSCN TRIM17 SNAP47 LOC100506571 RNA5S13 RNA5S10 DUSP5P1 HIST3H2BB MRPL55 RNA5S17 MIR4666A MIR6742 RNF187 RNA5S3 RNA5S14 RNA5S4 C1orf145 LOC101927401 RNA5S8 LOC101060022 LOC107985355 IBA57 GJC2 RHOU RNA5S6 JMJD4 C1orf35 RNA5S11 IBA57-AS1 PRSS38 MIR5008 RNA5S1 RNA5S5 LOC105373289 HIST3H3 RNA5S2 ARF1 GUK1 RNA5S16 MIR3620 RNA5S7
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain LOC101927401 HIST3H2A TRIM11 BTNL10 RNA5S8 RNA5S15 RNA5S12 RHOU RNA5S6 LOC105373132 RNA5S9 OBSCN TRIM17 RNA5S11 RNA5S13 RNA5S10 RNA5S1 DUSP5P1 RNA5S5 HIST3H2BB RNA5S17 MIR4666A HIST3H3 MIR6742 RNA5S2 RNF187 RNA5S3 RNA5S16 RNA5S14 RNA5S4 RNA5S7
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss LOC101927401 HIST3H2A TRIM11 OBSCN TRIM17 IBA57 IBA57-AS1 GJC2 HIST3H2BB MIR4666A HIST3H3 MIR6742 GUK1 C1orf145
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss LOC101927401 HIST3H2A TRIM11 WNT9A LOC101060022 LOC107985355 IBA57 WNT3A GJC2 C1orf35 OBSCN TRIM17 LOC100506571 IBA57-AS1 MIR5008 HIST3H2BB MRPL55 MIR4666A HIST3H3 MIR6742 RNF187 ARF1 GUK1 MIR3620 C1orf145
nsv549295 Chr.1:228276547 - 228413937 on Build GRCh38 Loss LOC101927401 TRIM11 MIR6742 OBSCN TRIM17
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion LOC101927401 TRIM11 HIST3H3 MIR6742 OBSCN TRIM17
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion LOC101927401 OBSCN

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