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See other FAAP20 CNV Assays ›
Gene Symbol
FAAP20
Assay Reference Genome
Location

Chr.1:2193323 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03357817_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 199990

Gene Name:

 Fanconi anemia core complex associated protein 20

Gene Aliases:

 C1orf86, FP7162

Location:

 Chr.1:2184460-2212720 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAAP20 NM_001146310.1 NP_001139782.1
NM_001256945.1 NP_001243874.1
NM_001256946.1 NP_001243875.1
NM_001256947.1 NP_001243876.1
NM_001282670.1 NP_001269599.1
NM_001282671.1 NP_001269600.1
NM_001282672.1 NP_001269601.1
NM_001282673.1 NP_001269602.1
NM_182533.2 NP_872339.2
NR_046427.1
XM_006710419.3 XP_006710482.1
XM_006710421.3 XP_006710484.1
XM_011540914.2 XP_011539216.1
XM_011540921.2 XP_011539223.1
XM_011540922.1 XP_011539224.1
XM_017000553.1 XP_016856042.1
XM_017000554.1 XP_016856043.1
XM_017000557.1 XP_016856046.1
AF461903.1 AAQ04817.1
AF469129.1 AAP97719.1
AK055593.1 BAB70965.1
AK126870.1 BAC86730.1
AK127994.1 BAC87220.1
AK128507.1 1 263
AL545931.3
BC066360.1 AAH66360.1
BC103992.2 AAI03993.1
BG825658.1
BU192678.1
BU542153.1
BU626113.1
CN397640.1
DA596011.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss KLHL17 MIR1302-2 WASH7P ISG15 TAS1R3 PUSL1 CPSF3L LOC100288175 LOC100288069 GABRD LOC105378591 MIR200A SKI HES4 CDK11B PRKCZ MMP23A TTLL10 LOC100133331 LOC100287934 VWA1 PLEKHN1 C1orf159 LINC01342 TNFRSF4 LOC729737 LOC105378592 TTLL10-AS1 CCNL2 MIR6859-2 LOC100506504 FAAP20 CALML6 MORN1 LOC105378949 ATAD3A MRPL20 DVL1 CFAP74 MIR6727 TNFRSF18 LINC01128 MIR6726 LOC105378948 LOC107984841 LOC100132287 NOC2L ATAD3C LOC107985729 FNDC10 SLC35E2 MIR6808 LOC284600 DDX11L1 MIR6723 LOC107985728 FAM41C ATAD3B FAM87B PERM1 SDF4 RNF223 MXRA8 CDK11A MIR6859-1 MTND2P28 FAM138A AURKAIP1 B3GALT6 LOC105378589 MIR429 LOC100134822 ACAP3 LOC100130417 LOC100129534 OR4F5 MTND1P23 LOC102724312 GNB1 TMEM88B LOC102725121 TMEM52 NADK MIB2 LOC105378947 SCNN1D AGRN MMP23B SSU72 CPTP OR4F29 FAM132A SLC35E2B OR4F16 MIR200B SAMD11 UBE2J2 LOC148413 LINC00115 TMEM240 ANKRD65 LOC101928626
dgv49n54 Chr.1:2151050 - 2289783 on Build GRCh38 Loss PRKCZ LOC105378592 LOC100506504 FAAP20 SKI
nsv951530 Chr.1:2153662 - 2229961 on Build GRCh38 Deletion PRKCZ LOC105378592 LOC100506504 FAAP20 SKI
nsv470682 Chr.1:2188394 - 2378754 on Build GRCh38 Loss MORN1 LOC105378592 FAAP20 LOC100129534 SKI
nsv834557 Chr.1:2117631 - 2311104 on Build GRCh38 Loss PRKCZ LOC105378592 LOC100506504 FAAP20 SKI

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