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See other FAAP20 CNV Assays ›
Gene Symbol
FAAP20
Assay Reference Genome
Location

Chr.1:2193323 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03357817_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 199990

Gene Name:

 Fanconi anemia core complex associated protein 20

Gene Aliases:

 C1orf86, FP7162

Location:

 Chr.1:2184460-2212720 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAAP20 NM_001146310.1 NP_001139782.1
NM_001256945.1 NP_001243874.1
NM_001256946.1 NP_001243875.1
NM_001256947.1 NP_001243876.1
NM_001282670.1 NP_001269599.1
NM_001282671.1 NP_001269600.1
NM_001282672.1 NP_001269601.1
NM_001282673.1 NP_001269602.1
NM_182533.2 NP_872339.2
NR_046427.1
XM_006710419.3 XP_006710482.1
XM_006710421.3 XP_006710484.1
XM_011540914.2 XP_011539216.1
XM_011540921.2 XP_011539223.1
XM_011540922.1 XP_011539224.1
XM_017000553.1 XP_016856042.1
XM_017000554.1 XP_016856043.1
XM_017000557.1 XP_016856046.1
AF461903.1 AAQ04817.1
AF469129.1 AAP97719.1
AK055593.1 BAB70965.1
AK126870.1 BAC86730.1
AK127994.1 BAC87220.1
AK128507.1 1 263
AL545931.3
BC066360.1 AAH66360.1
BC103992.2 AAI03993.1
BG825658.1
BU192678.1
BU542153.1
BU626113.1
CN397640.1
DA596011.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv461727 Chr.1:2151050 - 2251031 on Build GRCh38 Loss SKI LOC105378592 PRKCZ LOC100506504 FAAP20
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss UBE2J2 FAM132A MORN1 CPSF3L DVL1 FAM138A ISG15 MIB2 AGRN LOC100506504 MRPL20 MMP23A MIR200A LINC01342 GABRD FAM87B LOC100132287 LOC100288175 LOC101928626 FAAP20 SLC35E2 LOC100129534 MIR6723 MXRA8 RNF223 TMEM52 LOC105378948 SCNN1D ACAP3 LOC105378589 MIR6859-1 LOC100133331 TTLL10-AS1 TNFRSF18 KLHL17 MIR1302-2 PLEKHN1 NOC2L LOC100288069 OR4F29 LOC105378947 LOC107985728 TMEM88B DDX11L1 SLC35E2B WASH7P CPTP LOC102725121 MMP23B CALML6 FAM41C PRKCZ LOC107984841 LOC100130417 LOC105378592 TAS1R3 TNFRSF4 B3GALT6 PERM1 CCNL2 MIR6859-2 AURKAIP1 C1orf159 MTND2P28 LOC729737 LOC100134822 LOC148413 LOC107985729 MIR6727 TTLL10 CDK11A MIR6808 NADK ANKRD65 CFAP74 FNDC10 OR4F5 CDK11B MIR6726 SDF4 LOC284600 GNB1 MIR429 MIR200B ATAD3C ATAD3B PUSL1 LINC01128 LOC102724312 LINC00115 SKI SAMD11 VWA1 LOC105378949 MTND1P23 LOC105378591 SSU72 OR4F16 LOC100287934 TMEM240 HES4 ATAD3A
nsv951530 Chr.1:2153662 - 2229961 on Build GRCh38 Deletion SKI LOC105378592 PRKCZ LOC100506504 FAAP20
nsv470682 Chr.1:2188394 - 2378754 on Build GRCh38 Loss SKI LOC105378592 MORN1 FAAP20 LOC100129534
nsv834557 Chr.1:2117631 - 2311104 on Build GRCh38 Loss SKI LOC105378592 PRKCZ LOC100506504 FAAP20

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