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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228367084 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03359882_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
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4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 XP_011542652.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Exon 102
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 86 19611 NP_001092093.2
NM_001271223.2 97 22482 NP_001258152.2
XM_005273287.4 98 22868 XP_005273344.1
XM_005273291.4 98 22832 XP_005273348.1
XM_005273298.4 97 22559 XP_005273355.1
XM_005273307.4 93 21746 XP_005273364.1
XM_006711822.3 96 22292 XP_006711885.1
XM_006711823.3 96 22286 XP_006711886.1
XM_011544297.2 90 20702 XP_011542599.1
XM_011544299.2 89 20426 XP_011542601.1
XM_017002443.1 98 22913 XP_016857932.1
XM_017002444.1 98 22876 XP_016857933.1
XM_017002445.1 98 22910 XP_016857934.1
XM_017002446.1 98 22910 XP_016857935.1
XM_017002447.1 98 22910 XP_016857936.1
XM_017002448.1 98 22763 XP_016857937.1
XM_017002449.1 97 22650 XP_016857938.1
XM_017002450.1 97 22650 XP_016857939.1
XM_017002451.1 97 22650 XP_016857940.1
XM_017002452.1 97 22650 XP_016857941.1
XM_017002453.1 97 22637 XP_016857942.1
XM_017002454.1 97 22637 XP_016857943.1
XM_017002455.1 97 22637 XP_016857944.1
XM_017002456.1 97 22637 XP_016857945.1
XM_017002457.1 97 22637 XP_016857946.1
XM_017002458.1 96 22386 XP_016857947.1
XM_017002459.1 96 22386 XP_016857948.1
XM_017002460.1 96 22386 XP_016857949.1
XM_017002461.1 96 22373 XP_016857950.1
XM_017002462.1 96 22361 XP_016857951.1
XM_017002463.1 96 22340 XP_016857952.1
XM_017002464.1 96 22289 XP_016857953.1
XM_017002465.1 95 22122 XP_016857954.1
XM_017002466.1 95 22122 XP_016857955.1
XM_017002467.1 95 22122 XP_016857956.1
XM_017002468.1 94 21858 XP_016857957.1
XM_017002469.1 92 21330 XP_016857958.1
XM_017002470.1 87 20011 XP_016857959.1
AB046776.1 BAB13382.1
AB046859.2 26 3386 BAB13465.2
AM231061.1 12 1513 CAJ76912.1
DQ400343.1 12 1513

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain WNT9A HIST3H3 ARF1 JMJD4 LOC101927401 C1orf35 TRIM17 LOC100506571 MRPL55 MIR5008 GUK1 IBA57-AS1 MIR3620 C1orf145 MIR6742 WNT3A HIST3H2A LOC101060022 SNAP47 PRSS38 IBA57 RNF187 LOC107985355 OBSCN MIR4666A HIST3H2BB GJC2 TRIM11 LOC105373289
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain RNA5S12 HIST3H3 RNA5S4 RNA5S7 RNA5S17 RNA5S16 LOC101927401 TRIM17 RNA5S8 RNA5S6 DUSP5P1 RNA5S3 BTNL10 RNA5S2 MIR6742 RNA5S11 RNA5S14 HIST3H2A RNA5S15 RNA5S1 RNA5S13 RNA5S9 RNF187 RHOU OBSCN MIR4666A RNA5S10 HIST3H2BB LOC105373132 TRIM11 RNA5S5
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss LOC101927401 OBSCN HIST3H3 MIR4666A HIST3H2BB MIR6742 TRIM17 HIST3H2A TRIM11 RNF187
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain RNA5S17 JMJD4 LOC101927401 C1orf35 TRIM17 LOC100506571 BTNL10 MRPL55 GUK1 RNA5S2 IBA57-AS1 C1orf145 RNA5S15 RNA5S1 SNAP47 RNA5S9 RHOU OBSCN MIR4666A RNA5S10 LOC105373132 TRIM11 LOC105373289 RNA5S5 WNT9A RNA5S12 HIST3H3 RNA5S4 RNA5S7 ARF1 RNA5S16 RNA5S8 RNA5S6 DUSP5P1 RNA5S3 MIR5008 MIR3620 MIR6742 WNT3A RNA5S11 RNA5S14 HIST3H2A LOC101060022 PRSS38 RNA5S13 IBA57 RNF187 LOC107985355 HIST3H2BB GJC2
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss GUK1 IBA57-AS1 HIST3H3 C1orf145 MIR6742 HIST3H2A IBA57 LOC101927401 OBSCN MIR4666A HIST3H2BB GJC2 TRIM17 TRIM11
nsv549295 Chr.1:228276547 - 228413937 on Build GRCh38 Loss LOC101927401 OBSCN MIR6742 TRIM17 TRIM11
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss WNT9A HIST3H3 ARF1 LOC101927401 C1orf35 TRIM17 LOC100506571 MRPL55 MIR5008 GUK1 IBA57-AS1 MIR3620 C1orf145 MIR6742 WNT3A HIST3H2A LOC101060022 IBA57 RNF187 LOC107985355 OBSCN MIR4666A HIST3H2BB GJC2 TRIM11
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion LOC101927401 OBSCN HIST3H3 MIR6742 TRIM17 TRIM11
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion LOC101927401 OBSCN

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