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See other GJC2 CNV Assays ›
Gene Symbol
GJC2
Assay Reference Genome
Location

Chr.1:228155367 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03360014_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57165

Gene Name:

 gap junction protein gamma 2

Gene Aliases:

 CX46.6, Cx47, GJA12, HLD2, LMPH1C, PMLDAR, SPG44

Location:

 Chr.1:228149714-228159826 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GJC2 NM_020435.3 NP_065168.2
BC035840.1 AAH35840.1
BC089439.1 AAH89439.1
CF132637.1
EU433401.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952137 Chr.1:228140600 - 228182899 on Build GRCh38 Deletion GJC2 IBA57-AS1 IBA57 GUK1
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain ARF1 MIR4666A GJC2 C1orf35 LOC101927401 IBA57-AS1 LOC101060022 LOC107985355 HIST3H2BB LOC100506571 MRPL55 TRIM17 LOC105373289 HIST3H3 TRIM11 MIR6742 IBA57 GUK1 HIST3H2A MIR5008 JMJD4 WNT3A PRSS38 MIR3620 SNAP47 C1orf145 RNF187 WNT9A OBSCN
nsv1160102 Chr.1:228081212 - 228239280 on Build GRCh38 Deletion ARF1 MRPL55 GJC2 MIR3620 C1orf35 C1orf145 IBA57-AS1 IBA57 GUK1 OBSCN
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain ARF1 RNA5S4 GJC2 C1orf35 DUSP5P1 RNA5S7 RNA5S9 BTNL10 HIST3H2BB RNA5S12 LOC100506571 RNA5S15 RNA5S1 RNA5S10 TRIM11 RNA5S3 RNA5S5 RHOU IBA57 HIST3H2A RNA5S2 PRSS38 MIR3620 SNAP47 RNA5S8 RNF187 WNT9A RNA5S6 MIR4666A LOC101927401 IBA57-AS1 RNA5S17 LOC101060022 LOC107985355 MRPL55 TRIM17 LOC105373289 RNA5S11 HIST3H3 MIR6742 GUK1 MIR5008 JMJD4 WNT3A RNA5S14 RNA5S13 C1orf145 RNA5S16 LOC105373132 OBSCN
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss MIR4666A GJC2 LOC101927401 IBA57-AS1 IBA57 GUK1 HIST3H2A HIST3H2BB TRIM17 C1orf145 HIST3H3 OBSCN TRIM11 MIR6742
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss ARF1 MIR4666A GJC2 C1orf35 LOC101927401 IBA57-AS1 LOC101060022 LOC107985355 HIST3H2BB LOC100506571 MRPL55 TRIM17 HIST3H3 TRIM11 MIR6742 IBA57 GUK1 HIST3H2A MIR5008 WNT3A MIR3620 C1orf145 RNF187 WNT9A OBSCN
dgv839n54 Chr.1:228139958 - 228183397 on Build GRCh38 Loss GJC2 IBA57-AS1 IBA57 GUK1
nsv549290 Chr.1:228145951 - 228162105 on Build GRCh38 Loss GJC2 GUK1
nsv549291 Chr.1:228151238 - 228163073 on Build GRCh38 Loss GJC2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)


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