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See other SLC35E2B CNV Assays ›
Gene Symbol
SLC35E2B
Assay Reference Genome
Location

Chr.1:1682434 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03360311_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 728661

Gene Name:

 solute carrier family 35 member E2B

Gene Aliases:

 SLC35E2

Location:

 Chr.1:1661478-1692804 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC35E2B NM_001110781.2 NP_001104251.1
NM_001290264.1 NP_001277193.1
XM_011542072.1 XP_011540374.1
AB007916.3
AK125619.1
AK307886.1
BC110653.1 AAI10654.1
BG328537.1
CR936618.1 CAI56761.1
DA794179.1
DB450858.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n54 Chr.1:1663759 - 1696548 on Build GRCh38 Loss SLC35E2B
esv3585012 Chr.1:1677771 - 1684388 on Build GRCh38 Gain SLC35E2B
dgv5n111 Chr.1:1575421 - 1823403 on Build GRCh38 Deletion MIB2 CDK11A FNDC10 SLC35E2B NADK MMP23A SLC35E2 GNB1 MMP23B CDK11B
dgv8n100 Chr.1:1569349 - 1741152 on Build GRCh38 Loss MIB2 CDK11A FNDC10 SSU72 SLC35E2B MMP23A SLC35E2 MMP23B CDK11B
esv3575582 Chr.1:1624086 - 1721336 on Build GRCh38 Gain MIB2 CDK11A SLC35E2B MMP23A MMP23B CDK11B
esv3585010 Chr.1:1670280 - 1751138 on Build GRCh38 Loss CDK11A SLC35E2B MMP23A SLC35E2
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss CPSF3L SSU72 LOC105378592 LOC100129534 LOC105378589 LINC01342 AGRN MIR200B TAS1R3 MIR6727 CCNL2 SLC35E2 LINC00115 TMEM88B GABRD RNF223 LOC107985729 FNDC10 LOC105378949 ANKRD65 UBE2J2 NADK CPTP LOC105378947 ATAD3C OR4F29 FAM87B LOC729737 MIR429 CFAP74 CALML6 MRPL20 DVL1 ATAD3A MORN1 LOC100134822 OR4F16 LOC100288175 MIR6859-1 LOC105378948 MMP23A LOC102725121 ATAD3B ISG15 OR4F5 LOC101928626 B3GALT6 LOC102724312 SLC35E2B LINC01128 CDK11A LOC100132287 MTND2P28 MIR200A CDK11B FAM138A PRKCZ LOC100130417 LOC107984841 TTLL10 KLHL17 LOC100287934 PERM1 TNFRSF18 TMEM52 NOC2L LOC100506504 SDF4 FAM41C WASH7P DDX11L1 GNB1 MIR6723 TMEM240 MIR6808 C1orf159 MXRA8 PUSL1 MTND1P23 FAAP20 SKI TTLL10-AS1 MIR6859-2 LOC284600 VWA1 MIB2 HES4 LOC100288069 AURKAIP1 SCNN1D MMP23B LOC100133331 TNFRSF4 SAMD11 LOC107985728 MIR1302-2 LOC105378591 MIR6726 FAM132A PLEKHN1 LOC148413 ACAP3
nsv1160797 Chr.1:1566216 - 1805918 on Build GRCh38 Duplication MIB2 CDK11A FNDC10 SSU72 SLC35E2B NADK MMP23A SLC35E2 GNB1 MMP23B CDK11B
dgv2e199 Chr.1:1653096 - 1721890 on Build GRCh38 Deletion CDK11A SLC35E2B MMP23A CDK11B
esv2760410 Chr.1:1565561 - 1756248 on Build GRCh38 Gain+Loss MIB2 CDK11A FNDC10 SSU72 SLC35E2B NADK MMP23A SLC35E2 MMP23B CDK11B
esv3585007 Chr.1:1647187 - 1714507 on Build GRCh38 Loss CDK11A SLC35E2B MMP23A CDK11B
nsv950516 Chr.1:1663141 - 1715961 on Build GRCh38 Deletion CDK11A SLC35E2B MMP23A
esv27786 Chr.1:1632502 - 1752267 on Build GRCh38 Gain CDK11A SLC35E2B NADK MMP23A SLC35E2 MMP23B CDK11B
nsv545022 Chr.1:1665581 - 1683909 on Build GRCh38 Loss SLC35E2B
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss B3GALT6 CPSF3L SSU72 LOC102724312 SLC35E2B LINC01342 AGRN LINC01128 MIR200B TAS1R3 CDK11A MIR6727 CCNL2 SLC35E2 MIR200A LINC00115 TMEM88B CDK11B LOC100130417 TTLL10 KLHL17 RNF223 LOC100287934 PERM1 TNFRSF18 LOC107985729 NOC2L SDF4 FNDC10 FAM41C ANKRD65 UBE2J2 NADK CPTP ATAD3C TMEM240 MIR6808 C1orf159 MXRA8 PUSL1 FAM87B MIR429 TTLL10-AS1 LOC284600 VWA1 MIB2 MRPL20 HES4 LOC100288069 AURKAIP1 SCNN1D MMP23B DVL1 ATAD3A TNFRSF4 SAMD11 LOC107985728 LOC100288175 LOC105378948 MMP23A ATAD3B ISG15 MIR6726 FAM132A PLEKHN1 LOC148413 ACAP3
nsv545026 Chr.1:1671348 - 1706566 on Build GRCh38 Loss CDK11A SLC35E2B MMP23A
nsv545018 Chr.1:1638499 - 1688102 on Build GRCh38 Loss SLC35E2B CDK11B
dgv3n67 Chr.1:1653920 - 1735718 on Build GRCh38 Gain CDK11A SLC35E2B MMP23A SLC35E2 CDK11B
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss SSU72 LOC102724312 SLC35E2B LOC105378589 CFAP74 VWA1 MIB2 CDK11A CALML6 MRPL20 CCNL2 SLC35E2 MMP23B TMEM88B CDK11B GABRD PRKCZ ATAD3A MMP23A TMEM52 LOC107985729 ATAD3B LOC105378591 FNDC10 LOC105378949 ANKRD65 LOC148413 NADK ATAD3C GNB1 TMEM240

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

secondary carrier transporter

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