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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228368280 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03361775_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 2 974 XP_011542652.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 2 974 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Intron 103
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain MIR3620 TRIM17 MRPL55 TRIM11 WNT9A HIST3H2A IBA57-AS1 C1orf145 C1orf35 MIR6742 JMJD4 MIR5008 WNT3A SNAP47 PRSS38 IBA57 MIR4666A RNF187 LOC107985355 LOC101927401 LOC100506571 LOC105373289 GJC2 ARF1 LOC101060022 HIST3H3 HIST3H2BB OBSCN GUK1
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain RNA5S10 TRIM17 RNA5S15 RNA5S17 RNA5S4 TRIM11 LOC105373132 HIST3H2A MIR6742 RNA5S6 RNA5S12 RNA5S11 RNA5S5 RNA5S3 RNA5S14 MIR4666A RNF187 RNA5S1 RNA5S2 LOC101927401 RNA5S16 RNA5S8 RNA5S7 HIST3H3 HIST3H2BB OBSCN RNA5S9 RNA5S13 RHOU BTNL10 DUSP5P1
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss MIR4666A HIST3H2BB TRIM17 RNF187 OBSCN TRIM11 LOC101927401 HIST3H2A MIR6742 HIST3H3
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain RNA5S10 TRIM17 RNA5S15 MRPL55 RNA5S17 RNA5S4 HIST3H2A IBA57-AS1 C1orf145 C1orf35 MIR6742 RNA5S6 RNA5S12 RNA5S11 RNA5S3 WNT3A SNAP47 IBA57 MIR4666A RNA5S1 LOC100506571 GJC2 ARF1 OBSCN BTNL10 DUSP5P1 GUK1 MIR3620 TRIM11 WNT9A LOC105373132 JMJD4 MIR5008 RNA5S5 RNA5S14 PRSS38 RNF187 RNA5S2 LOC107985355 LOC101927401 RNA5S16 RNA5S8 RNA5S7 LOC105373289 LOC101060022 HIST3H3 HIST3H2BB RNA5S9 RNA5S13 RHOU
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss MIR4666A TRIM17 TRIM11 LOC101927401 HIST3H2A IBA57-AS1 C1orf145 MIR6742 GJC2 HIST3H3 HIST3H2BB OBSCN IBA57 GUK1
nsv549295 Chr.1:228276547 - 228413937 on Build GRCh38 Loss TRIM17 OBSCN TRIM11 LOC101927401 MIR6742
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss MIR3620 TRIM17 MRPL55 TRIM11 WNT9A HIST3H2A IBA57-AS1 C1orf145 C1orf35 MIR6742 MIR5008 WNT3A IBA57 MIR4666A RNF187 LOC107985355 LOC101927401 LOC100506571 GJC2 ARF1 LOC101060022 HIST3H3 HIST3H2BB OBSCN GUK1
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion TRIM17 OBSCN TRIM11 LOC101927401 MIR6742 HIST3H3
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion OBSCN LOC101927401

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