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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228368280 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03361775_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 2 974 XP_011542652.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 2 974 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Intron 103
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain HIST3H2BB TRIM11 MIR4666A OBSCN MIR3620 HIST3H3 WNT3A MRPL55 IBA57-AS1 MIR6742 WNT9A JMJD4 GUK1 LOC101927401 SNAP47 C1orf145 C1orf35 TRIM17 MIR5008 HIST3H2A LOC101060022 LOC105373289 RNF187 LOC100506571 ARF1 PRSS38 IBA57 GJC2 LOC107985355
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain RNA5S14 HIST3H2BB TRIM11 RNA5S10 MIR4666A OBSCN MIR3620 HIST3H3 MRPL55 MIR6742 WNT9A JMJD4 GUK1 C1orf35 RNA5S3 TRIM17 MIR5008 DUSP5P1 HIST3H2A LOC101060022 RNA5S9 RNA5S12 RHOU LOC105373289 RNF187 BTNL10 RNA5S7 RNA5S1 PRSS38 RNA5S16 IBA57 LOC107985355 RNA5S11 RNA5S2 WNT3A IBA57-AS1 RNA5S4 LOC101927401 SNAP47 C1orf145 RNA5S5 RNA5S13 LOC105373132 RNA5S6 RNA5S17 LOC100506571 ARF1 RNA5S8 RNA5S15 GJC2
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss HIST3H2BB RNF187 TRIM11 MIR4666A OBSCN HIST3H3 HIST3H2A TRIM17 MIR6742 LOC101927401
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain RNA5S14 HIST3H2BB TRIM11 RNA5S10 RNA5S11 MIR4666A OBSCN RNA5S2 HIST3H3 MIR6742 RNA5S4 LOC101927401 RNA5S3 RNA5S5 TRIM17 DUSP5P1 RNA5S13 HIST3H2A LOC105373132 RNA5S9 RNA5S6 RNA5S12 RHOU RNA5S17 RNF187 BTNL10 RNA5S7 RNA5S1 RNA5S8 RNA5S15 RNA5S16
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss HIST3H2BB TRIM11 MIR4666A OBSCN HIST3H3 HIST3H2A IBA57-AS1 MIR6742 GUK1 LOC101927401 C1orf145 TRIM17 IBA57 GJC2
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss HIST3H2BB TRIM11 MIR4666A OBSCN MIR3620 HIST3H3 WNT3A MRPL55 IBA57-AS1 MIR6742 WNT9A GUK1 LOC101927401 C1orf145 C1orf35 TRIM17 MIR5008 HIST3H2A LOC101060022 RNF187 LOC100506571 ARF1 IBA57 GJC2 LOC107985355
dgv840n54 Chr.1:228276547 - 228369087 on Build GRCh38 Loss OBSCN LOC101927401
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion TRIM11 OBSCN HIST3H3 TRIM17 MIR6742 LOC101927401
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion OBSCN LOC101927401

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