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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1299363 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03363811_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 10 - Intron 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 9 1327 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss MIR6726 ACAP3 SCNN1D UBE2J2
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC107985729 MIR1302-2 WASH7P PUSL1 CPTP FAM132A DVL1 ATAD3C LOC107984841 LINC01128 LOC100288175 MIR6723 C1orf159 LOC105378589 AURKAIP1 MIR429 LINC01342 PERM1 ISG15 LOC100288069 ANKRD65 LOC107985728 SCNN1D NOC2L MIR6808 LOC105378949 TAS1R3 LOC102724312 TMEM52 CDK11A LOC105378948 LINC00115 NADK MORN1 OR4F29 LOC100506504 GNB1 CALML6 UBE2J2 GABRD MMP23B FAM41C LOC100132287 CPSF3L TNFRSF18 LOC102725121 TTLL10 MIR6726 FAM87B SLC35E2 TMEM240 B3GALT6 MIR6727 ATAD3B MMP23A ATAD3A CCNL2 SSU72 SAMD11 FAM138A LOC100134822 SKI MRPL20 LOC729737 VWA1 KLHL17 MXRA8 PLEKHN1 LOC100133331 MIR200A MIR6859-2 LOC105378947 LOC101928626 TNFRSF4 MIR200B HES4 LOC100129534 TTLL10-AS1 LOC105378592 TMEM88B MIR6859-1 CFAP74 CDK11B OR4F5 LOC284600 FNDC10 MIB2 LOC148413 LOC100130417 MTND2P28 SLC35E2B PRKCZ ACAP3 RNF223 SDF4 FAAP20 LOC100287934 MTND1P23 DDX11L1 OR4F16 AGRN LOC105378591
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss MIR6726 FAM132A ACAP3 SCNN1D SDF4 B3GALT6 UBE2J2
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss MIR6726 PUSL1 MIR6808 CPTP TAS1R3 ACAP3 DVL1 CPSF3L MIR6727
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss MIR6726 ACAP3 SCNN1D
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss MIR6726 TTLL10-AS1 ACAP3 C1orf159 RNF223 SDF4 B3GALT6 MIR429 UBE2J2 MIR200A LINC01342 FAM132A TNFRSF4 MIR200B SCNN1D TNFRSF18 TTLL10
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR6726 TTLL10-AS1 TAS1R3 B3GALT6 MIR6727 PUSL1 CPTP FAM132A LOC105378948 LOC100288175 ACAP3 C1orf159 RNF223 SDF4 MIR429 UBE2J2 MIR200A LINC01342 TNFRSF4 AGRN MIR200B SCNN1D CPSF3L TNFRSF18 TTLL10
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MIR6726 PUSL1 MIR6808 CPTP TAS1R3 ACAP3 MXRA8 DVL1 AURKAIP1 SCNN1D CPSF3L MIR6727
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR6726 LOC107985729 FAM87B SLC35E2 TMEM240 B3GALT6 MIR6727 ATAD3B PUSL1 MMP23A ATAD3A CPTP FAM132A CCNL2 SSU72 DVL1 ATAD3C SAMD11 LINC01128 LOC100288175 MRPL20 C1orf159 VWA1 KLHL17 MXRA8 AURKAIP1 PLEKHN1 MIR429 MIR200A LINC01342 PERM1 TNFRSF4 ISG15 MIR200B LOC100288069 ANKRD65 LOC107985728 SCNN1D HES4 NOC2L TTLL10-AS1 MIR6808 TAS1R3 TMEM88B LOC102724312 CDK11A CDK11B LOC105378948 LOC284600 FNDC10 MIB2 LOC148413 LINC00115 NADK LOC100130417 SLC35E2B ACAP3 RNF223 SDF4 LOC100287934 UBE2J2 MMP23B FAM41C AGRN CPSF3L TNFRSF18 TTLL10
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIR6726 LOC107985729 TTLL10-AS1 MIR6808 TAS1R3 TMEM88B LOC102724312 TMEM240 B3GALT6 MIR6727 ATAD3B PUSL1 CDK11B ATAD3A CPTP FAM132A CCNL2 SSU72 FNDC10 DVL1 MIB2 LOC148413 ATAD3C MRPL20 ACAP3 C1orf159 VWA1 MXRA8 AURKAIP1 SDF4 MIR429 UBE2J2 MIR200A LINC01342 MMP23B TNFRSF4 MIR200B ANKRD65 SCNN1D CPSF3L TNFRSF18 TTLL10
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MIR6726 PUSL1 MIR6808 CPTP TAS1R3 ACAP3 MXRA8 DVL1 SCNN1D CPSF3L MIR6727
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6726 MIR6808 TAS1R3 ACAP3 MXRA8 AURKAIP1 MIR6727 UBE2J2 PUSL1 CPTP DVL1 SCNN1D CPSF3L
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain NOC2L MIR6726 TTLL10-AS1 MIR6808 TAS1R3 TMEM88B B3GALT6 MIR6727 PUSL1 CPTP FAM132A LOC105378948 CCNL2 LOC284600 DVL1 LOC148413 SAMD11 LOC100130417 LOC100288175 MRPL20 ACAP3 C1orf159 KLHL17 RNF223 MXRA8 AURKAIP1 SDF4 PLEKHN1 MIR429 UBE2J2 MIR200A LINC01342 PERM1 TNFRSF4 AGRN ISG15 MIR200B ANKRD65 LOC107985728 SCNN1D CPSF3L TNFRSF18 HES4 TTLL10
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR6726 TTLL10-AS1 ACAP3 SDF4 B3GALT6 MIR429 MIR6727 UBE2J2 MIR200A PUSL1 FAM132A TNFRSF4 MIR200B SCNN1D CPSF3L TNFRSF18 TTLL10

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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